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Slc9a6 solute carrier family 9 member A6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768229, updated on 8-Mar-2024

Summary

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Gene symbol
Slc9a6
Gene description
solute carrier family 9 member A6
Locus tag
I79_005975
See related
Ensembl:ENSCGRG00015009594
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613755.1 (1694398..1742417, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (15782365..15855905, complement)

NW_003613755.1Genomic Context describing neighboring genes Neighboring gene MAP7 domain containing 3 Neighboring gene four and a half LIM domains 1 Neighboring gene membrane magnesium transporter 1 Neighboring gene integrator complex subunit 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/hydrogen exchanger 6
Names
Sodium/hydrogen exchanger 6
solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613755.1 Reference CriGri_1.0 Primary Assembly

    Range
    1694398..1742417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035454144.1 → XP_035310035.1  sodium/hydrogen exchanger 6 isoform X1

    UniProtKB/TrEMBL
    A0A061HVL9
    Conserved Domains (1) summary
    TIGR00840
    Location:41 → 487
    b_cpa1; sodium/hydrogen exchanger 3

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    15782365..15855905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433375.2 → XP_027289176.1  sodium/hydrogen exchanger 6 isoform X3

    UniProtKB/TrEMBL
    A0A061HVL9, A0A9J7GQ20

  2. XM_027433376.2 → XP_027289177.1  sodium/hydrogen exchanger 6 isoform X3

    UniProtKB/TrEMBL
    A0A061HVL9, A0A9J7GQ20

  3. XM_027433374.2 → XP_027289175.1  sodium/hydrogen exchanger 6 isoform X2

    UniProtKB/TrEMBL
    A0A061HVL9, A0A8C2LN96
    Related
    ENSCGRP00015012535.1, ENSCGRT00015015349.2

  4. XM_035449934.1 → XP_035305825.1  sodium/hydrogen exchanger 6 isoform X4

    UniProtKB/TrEMBL
    A0A061HVL9, A0A9J7H7G5
    Conserved Domains (1) summary
    TIGR00840
    Location:94 → 540
    b_cpa1; sodium/hydrogen exchanger 3
Nucleotide Protein Strain
Heading Accession and Version

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