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Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768523, updated on 8-Mar-2024

Summary

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Gene symbol
Galnt10
Gene description
polypeptide N-acetylgalactosaminyltransferase 10
Locus tag
I79_009471
See related
Ensembl:ENSCGRG00015019713
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613916.1 (410854..479974, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (71703575..71845326)

NW_003613916.1Genomic Context describing neighboring genes Neighboring gene heart and neural crest derivatives expressed 1 Neighboring gene SAP30 like Neighboring gene microfibril associated protein 3 Neighboring gene family with sequence similarity 114 member A2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613916.1 Reference CriGri_1.0 Primary Assembly

    Range
    410854..479974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016975788.3 → XP_016831277.2  polypeptide N-acetylgalactosaminyltransferase 10 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:148 → 443
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:459 → 587
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    71703575..71845326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427436.2 → XP_027283237.1  polypeptide N-acetylgalactosaminyltransferase 10 isoform X3

    UniProtKB/TrEMBL
    A0A9J7JXM4
    Related
    ENSCGRP00015025968.1, ENSCGRT00015031829.2

  2. XM_027427435.2 → XP_027283236.1  polypeptide N-acetylgalactosaminyltransferase 10 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N1A1
    Related
    ENSCGRP00015025958.1, ENSCGRT00015031819.2

  3. XM_027427437.2 → XP_027283238.1  polypeptide N-acetylgalactosaminyltransferase 10 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GE79, G3HFV4
Nucleotide Protein Strain
Heading Accession and Version

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