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L2hgdh L-2-hydroxyglutarate dehydrogenase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768751, updated on 8-Mar-2024

Summary

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Gene symbol
L2hgdh
Gene description
L-2-hydroxyglutarate dehydrogenase
Locus tag
I79_020158
See related
Ensembl:ENSCGRG00015026114
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615169.1 (61346..91245)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (133670255..133700574)

NW_003615169.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase like 1 Neighboring gene distal membrane arm assembly component 2 like Neighboring gene chloride intracellular channel protein 4-like Neighboring gene cytochrome c oxidase subunit 6B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables (S)-2-hydroxy-acid oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-hydroxyglutarate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-2-hydroxyglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615169.1 Reference CriGri_1.0 Primary Assembly

    Range
    61346..91245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461888.1 → XP_035317779.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2N2L9
    Conserved Domains (1) summary
    PRK11728
    Location:61 → 457
    PRK11728; L-2-hydroxyglutarate oxidase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    133670255..133700574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035444871.1 → XP_035300762.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9J7H1H6
    Related
    ENSCGRP00015050795.1, ENSCGRT00015058253.1
    Conserved Domains (1) summary
    PRK11728
    Location:61 → 496
    PRK11728; L-2-hydroxyglutarate oxidase

  2. XM_027418161.2 → XP_027273962.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A9J7JPK3
    Related
    ENSCGRP00015034725.1, ENSCGRT00015042336.2
Nucleotide Protein Strain
Heading Accession and Version

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