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Atp6v0a4 ATPase H+ transporting V0 subunit a4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769769, updated on 8-Mar-2024

Summary

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Gene symbol
Atp6v0a4
Gene description
ATPase H+ transporting V0 subunit a4
Locus tag
I79_009982
See related
Ensembl:ENSCGRG00015027645
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613951.1 (843981..890262)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (190073071..190119198)

NW_003613951.1Genomic Context describing neighboring genes Neighboring gene KIAA1549 ortholog Neighboring gene transmembrane protein 213 Neighboring gene SVOP like Neighboring gene tripartite motif containing 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 116 kDa subunit a
Names
ATPase, H+ transporting, lysosomal V0 subunit a4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613951.1 Reference CriGri_1.0 Primary Assembly

    Range
    843981..890262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456393.1 → XP_035312284.1  V-type proton ATPase 116 kDa subunit a isoform X1

    UniProtKB/TrEMBL
    A0A3L7IKW3, G3HH84
    Conserved Domains (1) summary
    pfam01496
    Location:27 → 822
    V_ATPase_I; V-type ATPase 116kDa subunit family

  2. XM_035456394.1 → XP_035312285.1  V-type proton ATPase 116 kDa subunit a isoform X2

    UniProtKB/TrEMBL
    A0A9J7HB88, G3HH84
    Conserved Domains (1) summary
    pfam01496
    Location:27 → 786
    V_ATPase_I; V-type ATPase 116kDa subunit family

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    190073071..190119198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035451071.1 → XP_035306962.1  V-type proton ATPase 116 kDa subunit a isoform X1

    UniProtKB/TrEMBL
    A0A3L7IKW3, G3HH84
    Related
    ENSCGRP00015036859.1, ENSCGRT00015044961.2
    Conserved Domains (1) summary
    pfam01496
    Location:27 → 822
    V_ATPase_I; V-type ATPase 116kDa subunit family

  2. XM_035451072.1 → XP_035306963.1  V-type proton ATPase 116 kDa subunit a isoform X2

    UniProtKB/TrEMBL
    A0A9J7HB88, G3HH84
    Conserved Domains (1) summary
    pfam01496
    Location:27 → 786
    V_ATPase_I; V-type ATPase 116kDa subunit family
Nucleotide Protein Strain
Heading Accession and Version

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