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Pld4 phospholipase D family member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770231, updated on 8-Mar-2024

Summary

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Gene symbol
Pld4
Gene description
phospholipase D family member 4
Locus tag
I79_004716
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613702.1 (2320575..2327580)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (181286850..181293979, complement)

NW_003613702.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 42 Neighboring gene centrosomal protein 170B Neighboring gene AHNAK nucleoprotein 2 Neighboring gene clathrin binding box of aftiphilin containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'-3' exonuclease PLD4
Names
Phospholipase D4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613702.1 Reference CriGri_1.0 Primary Assembly

    Range
    2320575..2327580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448938.1 → XP_035304829.1  5'-3' exonuclease PLD4

    Conserved Domains (2) summary
    PHA02820
    Location:217 → 624
    PHA02820; phospholipase-D-like protein; Provisional
    cl15239
    Location:425 → 612
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    181286850..181293979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445910.1 → XP_035301801.1  5'-3' exonuclease PLD4

    UniProtKB/TrEMBL
    A0A9J7K9W1
    Conserved Domains (2) summary
    PHA02820
    Location:217 → 624
    PHA02820; phospholipase-D-like protein; Provisional
    cl15239
    Location:425 → 612
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
Nucleotide Protein Strain
Heading Accession and Version

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