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Slc1a6 solute carrier family 1 member 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770833, updated on 8-Mar-2024

Summary

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Gene symbol
Slc1a6
Gene description
solute carrier family 1 member 6
See related
Ensembl:ENSCGRG00015008126
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614083.1 (139568..164458, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (99859406..99880456)

NW_003614083.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 7C2 Neighboring gene family with sequence similarity 89 member A Neighboring gene tektin like 1 Neighboring gene caspase 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neutral L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
excitatory amino acid transporter 4
Names
Excitatory amino acid transporter 4
solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614083.1 Reference CriGri_1.0 Primary Assembly

    Range
    139568..164458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007645207.3 → XP_007643397.1  excitatory amino acid transporter 4

    See identical proteins and their annotated locations for XP_007643397.1

    UniProtKB/TrEMBL
    G3HM47
    Conserved Domains (1) summary
    pfam00375
    Location:56 → 520
    SDF; Sodium:dicarboxylate symporter family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    99859406..99880456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027419582.2 → XP_027275383.1  excitatory amino acid transporter 4

    UniProtKB/TrEMBL
    G3HM47
    Related
    ENSCGRP00015010527.1, ENSCGRT00015012926.2
Nucleotide Protein Strain
Heading Accession and Version

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