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Slc4a7 solute carrier family 4 member 7 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770901, updated on 8-Mar-2024

Summary

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Gene symbol
Slc4a7
Gene description
solute carrier family 4 member 7
See related
Ensembl:ENSCGRG00015016063
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613720.1 (2457468..2507838, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (172412319..172504537)

NW_003613720.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene NIMA related kinase 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in auditory receptor cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium bicarbonate cotransporter 3
Names
solute carrier family 4, sodium bicarbonate cotransporter, member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613720.1 Reference CriGri_1.0 Primary Assembly

    Range
    2457468..2507838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016974054.2 → XP_016829543.2  sodium bicarbonate cotransporter 3 isoform X9

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A9J7J776
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1003
    Band_3_cyto; Band 3 cytoplasmic domain

  2. XM_027429740.2 → XP_027285541.2  sodium bicarbonate cotransporter 3 isoform X7

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1A1
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1126
    Band_3_cyto; Band 3 cytoplasmic domain

  3. XM_027429715.2 → XP_027285516.2  sodium bicarbonate cotransporter 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F2E5
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1126
    Band_3_cyto; Band 3 cytoplasmic domain

  4. XM_027429707.2 → XP_027285508.2  sodium bicarbonate cotransporter 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7EZ25
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1135
    Band_3_cyto; Band 3 cytoplasmic domain

  5. XM_016974055.2 → XP_016829544.2  sodium bicarbonate cotransporter 3 isoform X10

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A9J7J7B2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1016
    Band_3_cyto; Band 3 cytoplasmic domain

  6. XM_016974053.2 → XP_016829542.2  sodium bicarbonate cotransporter 3 isoform X8

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A8C2QLD3
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1016
    Band_3_cyto; Band 3 cytoplasmic domain

  7. XM_016974052.2 → XP_016829541.2  sodium bicarbonate cotransporter 3 isoform X6

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7J5B1
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1139
    Band_3_cyto; Band 3 cytoplasmic domain

  8. XM_007639228.2 → XP_007637418.2  sodium bicarbonate cotransporter 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1B2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1139
    Band_3_cyto; Band 3 cytoplasmic domain

  9. XM_027429722.2 → XP_027285523.2  sodium bicarbonate cotransporter 3 isoform X5

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7EWQ7
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1148
    Band_3_cyto; Band 3 cytoplasmic domain

  10. XM_027429691.2 → XP_027285492.2  sodium bicarbonate cotransporter 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1C7
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1148
    Band_3_cyto; Band 3 cytoplasmic domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    172412319..172504537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027389363.2 → XP_027245164.1  sodium bicarbonate cotransporter 3 isoform X11

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1C7
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1148
    Band_3_cyto; Band 3 cytoplasmic domain

  2. XM_027389368.2 → XP_027245169.1  sodium bicarbonate cotransporter 3 isoform X15

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7EWQ7
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1148
    Band_3_cyto; Band 3 cytoplasmic domain

  3. XM_027389370.2 → XP_027245171.1  sodium bicarbonate cotransporter 3 isoform X16

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7J5B1
    Related
    ENSCGRP00015021097.2, ENSCGRT00015025923.2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1139
    Band_3_cyto; Band 3 cytoplasmic domain

  4. XM_027389365.2 → XP_027245166.1  sodium bicarbonate cotransporter 3 isoform X13

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7EZ25
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1135
    Band_3_cyto; Band 3 cytoplasmic domain

  5. XM_027389371.2 → XP_027245172.1  sodium bicarbonate cotransporter 3 isoform X17

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1A1
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1126
    Band_3_cyto; Band 3 cytoplasmic domain

  6. XM_027389364.2 → XP_027245165.1  sodium bicarbonate cotransporter 3 isoform X12

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F1B2
    Related
    ENSCGRP00015021058.2, ENSCGRT00015025881.2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1139
    Band_3_cyto; Band 3 cytoplasmic domain

  7. XM_027389372.2 → XP_027245173.1  sodium bicarbonate cotransporter 3 isoform X18

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A8C2QLD3
    Related
    ENSCGRP00015021152.1, ENSCGRT00015025991.2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1016
    Band_3_cyto; Band 3 cytoplasmic domain

  8. XM_027389374.2 → XP_027245175.1  sodium bicarbonate cotransporter 3 isoform X20

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A9J7J7B2
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1016
    Band_3_cyto; Band 3 cytoplasmic domain

  9. XM_027389366.2 → XP_027245167.1  sodium bicarbonate cotransporter 3 isoform X14

    UniProtKB/TrEMBL
    A0A8C2QLD5, A0A9J7F2E5
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1126
    Band_3_cyto; Band 3 cytoplasmic domain

  10. XM_027389373.2 → XP_027245174.1  sodium bicarbonate cotransporter 3 isoform X19

    UniProtKB/TrEMBL
    A0A8C2MV07, A0A9J7J776
    Conserved Domains (1) summary
    cl26877
    Location:118 → 1003
    Band_3_cyto; Band 3 cytoplasmic domain
Nucleotide Protein Strain
Heading Accession and Version

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