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Plcb4 phospholipase C beta 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770957, updated on 8-Mar-2024

Summary

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Gene symbol
Plcb4
Gene description
phospholipase C beta 4
Locus tag
I79_000437
See related
Ensembl:ENSCGRG00015009726
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
38
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613587.1 (2482348..2783554, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (42622253..42926981, complement)

NW_003613587.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L7a-like Neighboring gene lysosomal associated membrane protein family member 5 Neighboring gene NIF3-like protein 1 Neighboring gene 60S ribosomal protein L17-like Neighboring gene phospholipase C beta 1 Neighboring gene 60S ribosomal protein L39-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
Names
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613587.1 Reference CriGri_1.0 Primary Assembly

    Range
    2482348..2783554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027414371.2 → XP_027270172.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LN15, A0A9J7H217
    Conserved Domains (6) summary
    PTZ00121
    Location:847 → 1194
    PTZ00121; MAEBL; Provisional
    cd00275
    Location:702 → 818
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:312 → 668
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd13361
    Location:17 → 143
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16211
    Location:148 → 300
    EFh_PI-PLCbeta4; EF-hand motif found in phosphoinositide phospholipase C beta 4 (PI-PLC-beta4)
    pfam06631
    Location:914 → 955
    DUF1154; Protein of unknown function (DUF1154)

  2. XM_035447261.1 → XP_035303152.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X2

    UniProtKB/TrEMBL
    A0A9J7K767
    Conserved Domains (4) summary
    PTZ00121
    Location:579 → 926
    PTZ00121; MAEBL; Provisional
    cd08591
    Location:44 → 400
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    PLN02228
    Location:16 → 539
    PLN02228; Phosphoinositide phospholipase C
    pfam06631
    Location:646 → 687
    DUF1154; Protein of unknown function (DUF1154)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    42622253..42926981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446711.1 → XP_035302602.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LN15, A0A9J7H217
    Related
    ENSCGRP00015012825.1, ENSCGRT00015015685.2
    Conserved Domains (6) summary
    PTZ00121
    Location:847 → 1194
    PTZ00121; MAEBL; Provisional
    cd00275
    Location:702 → 818
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:312 → 668
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd13361
    Location:17 → 143
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16211
    Location:148 → 300
    EFh_PI-PLCbeta4; EF-hand motif found in phosphoinositide phospholipase C beta 4 (PI-PLC-beta4)
    pfam06631
    Location:914 → 955
    DUF1154; Protein of unknown function (DUF1154)

  2. XM_035446712.1 → XP_035302603.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X2

    UniProtKB/TrEMBL
    A0A9J7K767
    Conserved Domains (4) summary
    PTZ00121
    Location:579 → 926
    PTZ00121; MAEBL; Provisional
    cd08591
    Location:44 → 400
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    PLN02228
    Location:16 → 539
    PLN02228; Phosphoinositide phospholipase C
    pfam06631
    Location:646 → 687
    DUF1154; Protein of unknown function (DUF1154)
Nucleotide Protein Strain
Heading Accession and Version

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