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Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100772168, updated on 8-Mar-2024

Summary

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Gene symbol
Pip5k1c
Gene description
phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
Locus tag
I79_013838
See related
Ensembl:ENSCGRG00015001429
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614244.1 (547356..562867, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (102062140..102095036)

NW_003614244.1Genomic Context describing neighboring genes Neighboring gene thromboxane A2 receptor Neighboring gene cactin, spliceosome C complex subunit Neighboring gene tight junction protein 3 Neighboring gene amyloid beta precursor protein binding family A member 3 Neighboring gene mitochondrial ribosomal protein L54

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 gamma
Names
Phosphatidylinositol-4-phosphate 5-kinase type-1 gamma
phosphatidylinositol-4-phosphate 5-kinase, type I, gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614244.1 Reference CriGri_1.0 Primary Assembly

    Range
    547356..562867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458383.1 → XP_035314274.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

    UniProtKB/TrEMBL
    A0A9J7K957, G3HSK5
    Conserved Domains (1) summary
    cd17301
    Location:20 → 348
    PIPKc_PIP5KI; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in type I phosphatidylinositol 4-phosphate (PtdIns(4)P) 5-kinases (PIP5KI) and similar proteins

  2. XM_007646965.4 → XP_007645155.3  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X2

    UniProtKB/TrEMBL
    A0A8C2QJG8, G3HSK5
    Conserved Domains (1) summary
    cd17308
    Location:76 → 449
    PIPKc_PIP5K1C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 gamma (PIP5K1gamma) and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    102062140..102095036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035444890.1 → XP_035300781.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X5

    UniProtKB/TrEMBL
    A0A9J7H0C1, G3HSK5
    Conserved Domains (1) summary
    cl28923
    Location:1 → 342
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  2. XM_035444889.1 → XP_035300780.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

    UniProtKB/TrEMBL
    A0A9J7K957, G3HSK5
    Conserved Domains (1) summary
    cd17301
    Location:20 → 348
    PIPKc_PIP5KI; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in type I phosphatidylinositol 4-phosphate (PtdIns(4)P) 5-kinases (PIP5KI) and similar proteins

  3. XM_027419251.2 → XP_027275052.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X6

    UniProtKB/TrEMBL
    A0A8C2MCV0
    Related
    ENSCGRP00015001995.1, ENSCGRT00015002485.2

  4. XM_027419252.2 → XP_027275053.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X3

    UniProtKB/TrEMBL
    A0A8C2QJG8, G3HSK5
    Related
    ENSCGRP00015002005.1, ENSCGRT00015002496.2
    Conserved Domains (1) summary
    cd17308
    Location:76 → 449
    PIPKc_PIP5K1C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 gamma (PIP5K1gamma) and similar proteins

  5. XM_027419253.2 → XP_027275054.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X4

    UniProtKB/TrEMBL
    A0A8C2MJV9, G3HSK5
    Related
    ENSCGRP00015002067.2, ENSCGRT00015002569.2

  6. XM_035444891.1 → XP_035300782.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X7

    UniProtKB/TrEMBL
    A0A9J7GXZ7
    Conserved Domains (1) summary
    cd17308
    Location:76 → 449
    PIPKc_PIP5K1C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 gamma (PIP5K1gamma) and similar proteins

  7. XM_035444888.1 → XP_035300779.1  phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1

    UniProtKB/TrEMBL
    A0A9J7K957, G3HSK5
    Conserved Domains (1) summary
    cd17301
    Location:20 → 348
    PIPKc_PIP5KI; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in type I phosphatidylinositol 4-phosphate (PtdIns(4)P) 5-kinases (PIP5KI) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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