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Acly ATP citrate lyase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773325, updated on 8-Mar-2024

Summary

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Gene symbol
Acly
Gene description
ATP citrate lyase
Locus tag
I79_011700
See related
Ensembl:ENSCGRG00015002431
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Acly in Genome Data Viewer
Location:
chromosome: 7
Exon count:
21
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614078.1 (156803..195248, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003625302.1 (308..2657, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (113538918..113584148, complement)

NW_003625302.1Genomic Context describing neighboring genes

NW_003614078.1Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase, cytosolic IIIB Neighboring gene kelch like family member 10 Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene DnaJ heat shock protein family (Hsp40) member C7 Neighboring gene 2',3'-cyclic nucleotide 3' phosphodiesterase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP citrate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614078.1 Reference CriGri_1.0 Primary Assembly

    Range
    156803..195248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027438108.1 → XP_027293909.1  ATP-citrate synthase isoform X2

    UniProtKB/TrEMBL
    G3HLV6

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003625302.1 Reference CriGri_1.0 Primary Assembly

    Range
    308..2657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007608080.2 → XP_007606270.2  ATP-citrate synthase isoform X1

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    113538918..113584148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448351.1 → XP_035304242.1  ATP-citrate synthase isoform X4

    UniProtKB/TrEMBL
    A0A8C2MNK4, A0A9J7H6T2
    Related
    ENSCGRP00015004131.1, ENSCGRT00015005109.2
    Conserved Domains (2) summary
    PLN02522
    Location:479 → 1084
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  2. XM_035448353.1 → XP_035304244.1  ATP-citrate synthase isoform X4

    UniProtKB/TrEMBL
    A0A8C2MNK4, A0A9J7H6T2
    Conserved Domains (2) summary
    PLN02522
    Location:479 → 1084
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  3. XM_035448352.1 → XP_035304243.1  ATP-citrate synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C2MQZ1, A0A9J7GE25
    Related
    ENSCGRP00015004120.1, ENSCGRT00015005098.2
    Conserved Domains (2) summary
    PLN02522
    Location:489 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  4. XM_035448349.1 → XP_035304240.1  ATP-citrate synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C2MQZ1, A0A9J7GE25
    Conserved Domains (2) summary
    PLN02522
    Location:489 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  5. XM_027428154.2 → XP_027283955.1  ATP-citrate synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C2MQZ1, A0A9J7GE25
    Conserved Domains (2) summary
    PLN02522
    Location:489 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  6. XM_035448350.1 → XP_035304241.1  ATP-citrate synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C2MQZ1, A0A9J7GE25
    Conserved Domains (2) summary
    PLN02522
    Location:489 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  7. XM_027428153.2 → XP_027283954.1  ATP-citrate synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C2MQZ1, A0A9J7GE25
    Conserved Domains (2) summary
    PLN02522
    Location:489 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding
Nucleotide Protein Strain
Heading Accession and Version

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