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Slc17a6 solute carrier family 17 member 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773912, updated on 8-Mar-2024

Summary

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Gene symbol
Slc17a6
Gene description
solute carrier family 17 member 6
Locus tag
I79_014310
See related
Ensembl:ENSCGRG00015017985
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614297.1 (747753..784880)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (148469816..148507104)

NW_003614297.1Genomic Context describing neighboring genes Neighboring gene mRNA turnover protein 4 homolog Neighboring gene anoctamin 5 Neighboring gene uncharacterized LOC118238457

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter loading into synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synapse structure or activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in excitatory synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular glutamate transporter 2
Names
solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
solute carrier family 17 (vesicular glutamate transporter), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614297.1 Reference CriGri_1.0 Primary Assembly

    Range
    747753..784880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458644.1 → XP_035314535.1  vesicular glutamate transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7K5H0
    Conserved Domains (1) summary
    cd17382
    Location:75 → 499
    MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

  2. XM_003506804.5 → XP_003506852.1  vesicular glutamate transporter 2 isoform X1

    See identical proteins and their annotated locations for XP_003506852.1

    UniProtKB/TrEMBL
    A0A061IFV3
    Conserved Domains (1) summary
    cd17382
    Location:74 → 498
    MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    148469816..148507104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035442494.1 → XP_035298385.1  vesicular glutamate transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7K5H0
    Conserved Domains (1) summary
    cd17382
    Location:75 → 499
    MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

  2. XM_027410512.2 → XP_027266313.1  vesicular glutamate transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A061IFV3
    Related
    ENSCGRP00015023655.1, ENSCGRT00015028995.2
    Conserved Domains (1) summary
    cd17382
    Location:74 → 498
    MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters
Nucleotide Protein Strain
Heading Accession and Version

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