U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Slc6a9 solute carrier family 6 member 9 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774471, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Slc6a9
Gene description
solute carrier family 6 member 9
Locus tag
I79_009295
See related
Ensembl:ENSCGRG00015000381
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613906.1 (116917..151202)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (34454503..34488682, complement)

NW_003613906.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 17 Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain containing 24 Neighboring gene beta-1,4-galactosyltransferase 2 Neighboring gene ATPase H+ transporting V0 subunit b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glycinergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium- and chloride-dependent glycine transporter 1
Names
Sodium- and chloride-dependent glycine transporter 1
solute carrier family 6 (neurotransmitter transporter, glycine), member 9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613906.1 Reference CriGri_1.0 Primary Assembly

    Range
    116917..151202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007643280.4 → XP_007641470.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MLU0
    Conserved Domains (1) summary
    cl00456
    Location:26 → 556
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_007643279.4 → XP_007641469.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MLU0
    Conserved Domains (1) summary
    cd11498
    Location:11 → 594
    SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    34454503..34488682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399017.2 → XP_027254818.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MJN0, A0A8C2MLU0
    Related
    ENSCGRP00015000345.1, ENSCGRT00015000463.2

  2. XM_027399018.2 → XP_027254819.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MLU0, A0A9J7FBZ5
    Related
    ENSCGRP00015047098.1, ENSCGRT00015083236.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.