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Atp6v1b2 ATPase H+ transporting V1 subunit B2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774665, updated on 8-Mar-2024

Summary

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Gene symbol
Atp6v1b2
Gene description
ATPase H+ transporting V1 subunit B2
Locus tag
I79_006080
See related
Ensembl:ENSCGRG00015028491
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Atp6v1b2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613760.1 (1469049..1486369)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (245778841..245803586)

NW_003613760.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene solute carrier family 18 member A1 Neighboring gene leucine zipper tumor suppressor 1 Neighboring gene uncharacterized LOC107977818

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit B, brain isoform
Names
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613760.1 Reference CriGri_1.0 Primary Assembly

    Range
    1469049..1486369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007640664.3 → XP_007638854.1  V-type proton ATPase subunit B, brain isoform isoform X1

    See identical proteins and their annotated locations for XP_007638854.1

    UniProtKB/TrEMBL
    A0A061IQ35, G3H6W0
    Conserved Domains (4) summary
    cd01135
    Location:118 → 401
    V_A-ATPase_B; V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi ...
    TIGR01040
    Location:46 → 509
    V-ATPase_V1_B; V-type (H+)-ATPase V1, B subunit
    pfam00306
    Location:417 → 510
    ATP-synt_ab_C; ATP synthase alpha/beta chain, C terminal domain
    pfam02874
    Location:50 → 116
    ATP-synt_ab_N; ATP synthase alpha/beta family, beta-barrel domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    245778841..245803586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027388879.2 → XP_027244680.1  V-type proton ATPase subunit B, brain isoform isoform X2

    UniProtKB/TrEMBL
    A0A061IQ35, G3H6W0
    Related
    ENSCGRP00015038102.2, ENSCGRT00015046407.2
Nucleotide Protein Strain
Heading Accession and Version

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