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Pdhb pyruvate dehydrogenase E1 subunit beta [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774878, updated on 11-Apr-2024

Summary

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Gene symbol
Pdhb
Gene description
pyruvate dehydrogenase E1 subunit beta
See related
Ensembl:ENSCGRG00015026920
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613911.1 (547857..552397)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (76093309..76099852, complement)

NW_003613911.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family G member 3 Neighboring gene 40S ribosomal protein S3-like Neighboring gene PX domain containing serine/threonine kinase like Neighboring gene hydroxyacyl-thioester dehydratase type 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase E1 component subunit beta, mitochondrial
Names
pyruvate dehydrogenase (lipoamide) beta
pyruvate dehydrogenase E1 beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613911.1 Reference CriGri_1.0 Primary Assembly

    Range
    547857..552397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007643341.3 → XP_007641531.1  pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_007641531.1

    UniProtKB/TrEMBL
    A0A8C2MC65
    Conserved Domains (3) summary
    cd07036
    Location:40 → 206
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    PLN02683
    Location:30 → 359
    PLN02683; pyruvate dehydrogenase E1 component subunit beta
    pfam02780
    Location:229 → 352
    Transketolase_C; Transketolase, C-terminal domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    76093309..76099852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027387723.2 → XP_027243524.1  pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2M8Y5, A0A8C2MC65
    Related
    ENSCGRP00015035868.1, ENSCGRT00015043745.2
Nucleotide Protein Strain
Heading Accession and Version

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