LOC100910526 sulfotransferase 1C2-like [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: LOC100910526provided by RGD
Full Name: sulfotransferase 1C2-likeprovided by RGD
Primary source: RGD:6497849
Gene type: protein coding
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: sultK1
Annotation information: Note: LOC100910526 appears to be a duplicate placement of Sult1c2 (GeneID: 171072) on Rnor_6.0 (Annot. Release 105). BLAST analysis of Sult1c2 underlying component AABR07066190.1 shows high sequence identity with AABR07066204.1 (98% coverage, 99% identity), on which LOC100911599 is annotated. However it is difficult to be confident that LOC100910526 is a duplicate placement considering that both genes are annotated only on the reference assembly and not on Celera. Further complicating this interpretation, there are multiple nearby paralogs in syntenic regions in the mouse and human genome and many gaps around and between these genes on the rat reference assembly. [12 Mar 2015]
Expression: Restricted expression toward (RPKM 3496.6) See more
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Annotation release	Status	Assembly	Chr	Location
106	latest, but not current	Rnor_6.0 (GCF_000001895.5)	9	NC_005108.4 (4820678..4834271)

Genomic Sequence:: NC_005108.4 Chromosome 9 Reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016