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LOC100911672 atrophin-1-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100911672, discontinued on 16-Mar-2021

Summary

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Symbol
LOC100911672provided by RGD
Full Name
atrophin-1-likeprovided by RGD
Primary source
RGD:6491795
Gene type
protein coding
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 29.3), Adrenal (RPKM 26.9) and 9 other tissues See more
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Genomic context

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Location:
9q13
Exon count:
11
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (20264414..20278263)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005108.4 Chromosome 9 Reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Names
atrophin-1-like
atrophin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005108.4 Reference Rnor_6.0 Primary Assembly

    Range
    20264414..20278263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008766913.2 → XP_008765135.1  

  2. XM_003750658.4 → XP_003750706.1  

  3. XM_006244637.3 → XP_006244699.1  

Gene LinkOut

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