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LOC100912425 putative transcription factor ovo-like protein 3-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100912425, discontinued on 1-Feb-2021
  • This record was withdrawn by the Rat Genome Database (RGD).

Summary

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Symbol
LOC100912425provided by RGD
Full Name
putative transcription factor ovo-like protein 3-likeprovided by RGD
Primary source
RGD:6486906
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record was withdrawn by the Rat Genome Database (RGD).
Annotation information
Note: GeneIDs 100912425 and 365226 are annotated independently on Rnor_6.0 (Annotation Release 105) but may be redundant loci. [24 Feb 2015]
Expression
Biased expression in Testes (RPKM 3.9), Kidney (RPKM 2.6) and 9 other tissues See more
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Genomic context

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Location:
1q21
Exon count:
4
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (88688278..88692125, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005100.4 Chromosome 1 Reference Rnor_6.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Names
putative transcription factor ovo-like protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    88688278..88692125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003748828.3 → XP_003748876.1  

Gene LinkOut

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Molecular Biology Databases