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LOC101928866 uncharacterized LOC101928866 [ Homo sapiens (human) ]

Gene ID: 101928866, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101928866
Gene description
uncharacterized LOC101928866
See related
Ensembl:ENSG00000285910
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 3.7) See more
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Genomic context

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See LOC101928866 in Genome Data Viewer
Location:
1q25.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (178501458..178513050, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (177856181..177867774, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RAS protein activator like 2 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:178386599-178387798 Neighboring gene ribosomal protein S14 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:178452792-178452968 Neighboring gene MPRA-validated peak476 silencer Neighboring gene negCOR silencer S4 Neighboring gene C-type lectin domain containing 20A Neighboring gene uncharacterized LOC105371631 Neighboring gene testis expressed 35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    178501458..178513050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001738305.2 RNA Sequence

  2. XR_001738307.2 RNA Sequence

  3. XR_922305.3 RNA Sequence

  4. XR_001738306.2 RNA Sequence

  5. XR_922303.3 RNA Sequence

    Related
    ENST00000647674.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    177856181..177867774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070875.1 RNA Sequence

  2. XR_007070878.1 RNA Sequence

  3. XR_007070877.1 RNA Sequence

  4. XR_007070879.1 RNA Sequence

  5. XR_007070876.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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