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LOC102550598 small proline-rich protein 2I-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550598, discontinued on 23-Mar-2021
  • This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Summary

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Symbol
LOC102550598provided by RGD
Full Name
small proline-rich protein 2I-likeprovided by RGD
Primary source
RGD:7690861
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Expression
Biased expression in Uterus (RPKM 5.9), Thymus (RPKM 4.3) and 2 other tissues See more
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Genomic context

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Location:
2q34
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (192520019..192521188)
106 latest, but not current Rn_Celera (GCF_000002265.2) 2 AC_000070.1 (172345427..172346715, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
small proline-rich protein 2I-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005101.4 Reference Rnor_6.0 Primary Assembly

    Range
    192520019..192521188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006232816.3 → XP_006232878.1  

Alternate Rn_Celera

Genomic

  1. AC_000070.1 Alternate Rn_Celera

    Range
    172345427..172346715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008775198.1 → XP_008773420.1  

Gene LinkOut

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Molecular Biology Databases