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LOC102725035 leukocyte immunoglobulin-like receptor subfamily B member 3 [ Homo sapiens (human) ]

Gene ID: 102725035, updated on 3-Apr-2024

Summary

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Gene symbol
LOC102725035
Gene description
leukocyte immunoglobulin-like receptor subfamily B member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
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Genomic context

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Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 (ALT_REF_LOCI_7) NW_003571060.1 (191264..198156, complement)

NW_003571060.1Genomic Context describing neighboring genes Neighboring gene membrane bound O-acyltransferase domain containing 7 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:54692762-54693444 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:54693445-54694126 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:54695049-54695250 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54696095-54696610 Neighboring gene tRNA splicing endonuclease subunit 34 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54704113-54704783 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54709694-54710202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54710710-54711217 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54711218-54711724 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:54711820-54712003 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:54712450-54712625 Neighboring gene ribosomal protein S9 Neighboring gene uncharacterized LOC124905402 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54720754-54721590 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54721591-54722426 Neighboring gene LSM14A, SCD6 homolog A (S. cerevisiae) pseudogene Neighboring gene uncharacterized LOC107985279 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54735962-54736715 Neighboring gene leukocyte immunoglobulin like receptor A6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003571060.1 Chromosome 19 Reference GRCh38.p14 ALT_REF_LOCI_7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General protein information

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Preferred Names
leukocyte immunoglobulin-like receptor subfamily A member 6; leukocyte immunoglobulin-like receptor subfamily B member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 ALT_REF_LOCI_7

Genomic

  1. NW_003571060.1 Reference GRCh38.p14 ALT_REF_LOCI_7

    Range
    191264..198156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006726314.5 → XP_006726377.1  leukocyte immunoglobulin-like receptor subfamily B member 3 isoform X6

    See identical proteins and their annotated locations for XP_006726377.1

    UniProtKB/TrEMBL
    A0A0G2JQ25
    Conserved Domains (3) summary
    cd05751
    Location:27 → 118
    Ig1_LILRB1_like; First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins
    smart00410
    Location:237 → 296
    IG_like; Immunoglobulin like
    cl11960
    Location:123 → 217
    Ig; Immunoglobulin domain

  2. XM_047443035.1 → XP_047298991.1  leukocyte immunoglobulin-like receptor subfamily A member 6 isoform X1

  3. XM_011548575.4 → XP_011546877.1  leukocyte immunoglobulin-like receptor subfamily B member 3 isoform X4

    UniProtKB/TrEMBL
    A0A0G2JPR9
    Conserved Domains (3) summary
    cd05751
    Location:27 → 118
    Ig1_LILRB1_like; First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins
    smart00410
    Location:237 → 296
    IG_like; Immunoglobulin like
    cl11960
    Location:123 → 217
    Ig; Immunoglobulin domain

  4. XM_011548574.4 → XP_011546876.1  leukocyte immunoglobulin-like receptor subfamily B member 3 isoform X2

    UniProtKB/TrEMBL
    A0A0G2JMZ3, A0A0G2JPR9
    Conserved Domains (3) summary
    cd00096
    Location:140 → 144
    Ig; Ig strand B [structural motif]
    cd05751
    Location:28 → 116
    IgC2_D1_LILR_KIR_like; First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILRs), Natural killer inhibitory receptors (KIRs) and similar domains; member of Immunoglobulin Constant-2 set of IgSF domains
    cl11960
    Location:123 → 217
    Ig; Immunoglobulin domain

  5. XM_006726313.5 → XP_006726376.1  leukocyte immunoglobulin-like receptor subfamily B member 3 isoform X5

    UniProtKB/TrEMBL
    A0A0G2JM46, A0A0G2JQ25
    Conserved Domains (3) summary
    cd00096
    Location:140 → 144
    Ig; Ig strand B [structural motif]
    cd05751
    Location:28 → 116
    IgC2_D1_LILR_KIR_like; First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILRs), Natural killer inhibitory receptors (KIRs) and similar domains; member of Immunoglobulin Constant-2 set of IgSF domains
    cl11960
    Location:123 → 217
    Ig; Immunoglobulin domain

  6. XM_047443036.1 → XP_047298992.1  leukocyte immunoglobulin-like receptor subfamily A member 6 isoform X3

RNA

  1. XR_007068898.1 RNA Sequence

Nucleotide Protein
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