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LINC00383 long intergenic non-protein coding RNA 383 [ Homo sapiens (human) ]

Gene ID: 103689913, updated on 10-Oct-2023

Summary

Official Symbol
LINC00383provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 383provided by HGNC
Primary source
HGNC:HGNC:42710
See related
Ensembl:ENSG00000235221 AllianceGenome:HGNC:42710
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC00401
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Genomic context

See LINC00383 in Genome Data Viewer
Location:
13q21.33
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (69222346..69322101)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (68444596..68544304)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (69796478..69896233)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:69581239-69581790 Neighboring gene zinc finger DHHC-type containing 20 pseudogene 4 Neighboring gene small nuclear ribonucleoprotein polypeptide F pseudogene 3 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:69771203-69771954 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:69808136-69809120 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:69809121-69810105 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:69992288-69992964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:70057767-70058266 Neighboring gene serine and arginine rich splicing factor 1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5392 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:70154274-70154848 Neighboring gene MPRA-validated peak2077 silencer Neighboring gene kelch like family member 1 Neighboring gene RNY3 pseudogene 10

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125752.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL355478, AL356111
    Related
    ENST00000648574.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    69222346..69322101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    68444596..68544304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)