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LINC01670 long intergenic non-protein coding RNA 1670 [ Homo sapiens (human) ]

Gene ID: 105379487, updated on 10-Oct-2023

Summary

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Official Symbol
LINC01670provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1670provided by HGNC
Primary source
HGNC:HGNC:52458
See related
Ensembl:ENSG00000279094 AllianceGenome:HGNC:52458
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in prostate (RPKM 4.0), bone marrow (RPKM 2.1) and 25 other tissues See more
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Genomic context

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See LINC01670 in Genome Data Viewer
Location:
21p12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (5499023..5502575, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene periodic tryptophan protein 2 homolog Neighboring gene trafficking protein particle complex subunit 10-like Neighboring gene uncharacterized LOC105379488 Neighboring gene long intergenic non-protein coding RNA 3104

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000021.9 Chromosome 21 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    5499023..5502575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951086.3 RNA Sequence

    Related
    ENST00000624261.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases