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NTM neurotrimin [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105476177, updated on 13-Mar-2024

Summary

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Gene symbol
NTM
Gene description
neurotrimin
See related
Ensembl:ENSMNEG00000040992
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012016244.1 (2406837..3820125, complement)

NW_012016244.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105476163 Neighboring gene opioid binding protein/cell adhesion molecule like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC105476176 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene uncharacterized LOC105476175 Neighboring gene uncharacterized LOC112425678 Neighboring gene uncharacterized LOC105476171 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC105476181 Neighboring gene uncharacterized LOC105476180 Neighboring gene sorting nexin 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012016244 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurotrimin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012016244.1 Reference Mnem_1.0

    Range
    2406837..3820125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011731850.2 → XP_011730152.1  neurotrimin isoform X1

    See identical proteins and their annotated locations for XP_011730152.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  2. XM_011731857.1 → XP_011730159.1  neurotrimin isoform X7

    See identical proteins and their annotated locations for XP_011730159.1

    UniProtKB/TrEMBL
    A0A2K6DIF5, A0A2K6DIF9
    Related
    ENSMNEP00000035681.1, ENSMNET00000060140.1
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  3. XM_011731854.1 → XP_011730156.1  neurotrimin isoform X4

    See identical proteins and their annotated locations for XP_011730156.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Related
    ENSMNEP00000035688.1, ENSMNET00000060147.1
    Conserved Domains (4) summary
    smart00408
    Location:149 → 205
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:233 → 310
    IG_like; Immunoglobulin like
    pfam00047
    Location:226 → 308
    ig; Immunoglobulin domain
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  4. XM_024791132.1 → XP_024646900.1  neurotrimin isoform X3

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  5. XM_011731849.1 → XP_011730151.1  neurotrimin isoform X1

    See identical proteins and their annotated locations for XP_011730151.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  6. XM_024791133.1 → XP_024646901.1  neurotrimin isoform X8

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  7. XM_011731856.1 → XP_011730158.1  neurotrimin isoform X6

    See identical proteins and their annotated locations for XP_011730158.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  8. XM_011731851.1 → XP_011730153.1  neurotrimin isoform X2

    See identical proteins and their annotated locations for XP_011730153.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:213 → 290
    Ig_3; Immunoglobulin domain
    cd00096
    Location:214 → 220
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:35 → 123
    Ig; Immunoglobulin domain

  9. XM_011731858.2 → XP_011730160.1  neurotrimin isoform X9

    See identical proteins and their annotated locations for XP_011730160.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Related
    ENSMNEP00000035700.1, ENSMNET00000060159.1
    Conserved Domains (3) summary
    pfam13927
    Location:181 → 258
    Ig_3; Immunoglobulin domain
    cd00096
    Location:182 → 188
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:3 → 91
    Ig; Immunoglobulin domain

  10. XM_011731859.2 → XP_011730161.1  neurotrimin isoform X11

    See identical proteins and their annotated locations for XP_011730161.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:181 → 258
    Ig_3; Immunoglobulin domain
    cd00096
    Location:182 → 188
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:3 → 91
    Ig; Immunoglobulin domain

  11. XM_011731855.2 → XP_011730157.1  neurotrimin isoform X5

    See identical proteins and their annotated locations for XP_011730157.1

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (4) summary
    smart00408
    Location:130 → 186
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:214 → 291
    IG_like; Immunoglobulin like
    pfam00047
    Location:207 → 289
    ig; Immunoglobulin domain
    cl11960
    Location:25 → 113
    Ig; Immunoglobulin domain

  12. XM_024791134.1 → XP_024646902.1  neurotrimin isoform X10

    UniProtKB/TrEMBL
    A0A2K6DIF9
    Conserved Domains (3) summary
    pfam13927
    Location:203 → 280
    Ig_3; Immunoglobulin domain
    cd00096
    Location:204 → 210
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:25 → 113
    Ig; Immunoglobulin domain
Nucleotide Protein
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