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abo.4.L ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 4 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108698863, updated on 18-Aug-2023

Summary

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Official Symbol
abo.4.L
Official Full Name
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 4 L homeolog
Primary source
Xenbase:XB-GENE-17341092
Locus tag
XELAEV_18038379mg
See related
EnsemblRapid:ENSXLAG00005020380
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (7087941..7102919)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (6960752..6979412)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene surfeit 6 L homeolog Neighboring gene histo-blood group ABO system transferase-like Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 2 L homeolog Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) L homeolog Neighboring gene uncharacterized LOC121396866

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
histo-blood group ABO system transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    7087941..7102919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041572392.1 → XP_041428326.1  histo-blood group ABO system transferase isoform X1

    UniProtKB/TrEMBL
    A0A8J1LG22, A0A974H6Y2
    Related
    ENSXLAP00005059659.1, ENSXLAT00005061108.1
    Conserved Domains (1) summary
    cd02515
    Location:76 → 346
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

  2. XM_041572393.1 → XP_041428327.1  histo-blood group ABO system transferase isoform X2

    UniProtKB/TrEMBL
    A0A8J1LFN2, A0A974H6Y2
    Conserved Domains (1) summary
    cd02515
    Location:48 → 318
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

RNA

  1. XR_005963220.1 RNA Sequence

  2. XR_005963221.1 RNA Sequence

Nucleotide Protein Strain
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