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Gjb2 gap junction protein, beta 2 [ Mus musculus (house mouse) ]

Gene ID: 14619, updated on 21-May-2024

Summary

Official Symbol
Gjb2provided by MGI
Official Full Name
gap junction protein, beta 2provided by MGI
Primary source
MGI:MGI:95720
See related
Ensembl:ENSMUSG00000046352 AllianceGenome:MGI:95720
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cx26; Cxne; Cnx26; Gjb-2
Summary
Enables gap junction channel activity. Involved in cell-cell signaling and gap junction-mediated intercellular transport. Acts upstream of or within gap junction assembly. Located in gap junction. Is integral component of plasma membrane. Part of connexin complex. Is expressed in several structures, including alimentary system; ear; genitourinary system; meninges; and skin. Used to study autosomal dominant keratitis-ichthyosis-deafness syndrome and autosomal recessive nonsyndromic deafness 1A. Human ortholog(s) of this gene implicated in Bart-Pumphrey syndrome; Vohwinkel syndrome; autosomal dominant keratitis-ichthyosis-deafness syndrome; nonsyndromic deafness (multiple); and palmoplantar keratoderma-deafness syndrome. Orthologous to human GJB2 (gap junction protein beta 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 59.7), placenta adult (RPKM 35.5) and 8 other tissues See more
Orthologs
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Genomic context

See Gjb2 in Genome Data Viewer
Location:
14 C3; 14 30.1 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (57336059..57342159, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (57098602..57104702, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA B020004C17 gene Neighboring gene gap junction protein, alpha 3 Neighboring gene predicted gene, 32912 Neighboring gene predicted gene 4491 Neighboring gene gap junction protein, beta 6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables gap junction channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables gap junction channel activity IDA
Inferred from Direct Assay
more info
PubMed 
enables gap junction channel activity ISO
Inferred from Sequence Orthology
more info
 
enables gap junction channel activity involved in cell communication by electrical coupling ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 
involved_in cell-cell signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell-cell signaling IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within gap junction assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in gap junction assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in gap junction-mediated intercellular transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in gap junction-mediated intercellular transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in gap junction-mediated intercellular transport ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in anchoring junction IEA
Inferred from Electronic Annotation
more info
 
located_in astrocyte projection ISO
Inferred from Sequence Orthology
more info
 
located_in cell body ISO
Inferred from Sequence Orthology
more info
 
located_in cell junction ISO
Inferred from Sequence Orthology
more info
 
part_of connexin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of connexin complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of connexin complex ISO
Inferred from Sequence Orthology
more info
 
located_in gap junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in gap junction ISO
Inferred from Sequence Orthology
more info
 
located_in lateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
gap junction beta-2 protein
Names
connexin e
connexin-26
gap junction membrane channel protein beta 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008125.3NP_032151.1  gap junction beta-2 protein

    See identical proteins and their annotated locations for NP_032151.1

    Status: VALIDATED

    Source sequence(s)
    AK146485, BB756861
    Consensus CDS
    CCDS27153.1
    UniProtKB/Swiss-Prot
    Q00977
    UniProtKB/TrEMBL
    Q3TZE5, Q3UJE9, Q3UY12
    Related
    ENSMUSP00000054343.8, ENSMUST00000055698.8
    Conserved Domains (1) summary
    pfam00029
    Location:2213
    Connexin; Connexin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    57336059..57342159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)