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PCYB_146130 serine hydroxymethyltransferase [ Plasmodium cynomolgi strain B ]

Gene ID: 14695566, updated on 28-Dec-2023

Summary

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Gene symbol
PCYB_146130
Gene description
serine hydroxymethyltransferase
Locus tag
PCYB_146130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 14
Exon count:
1
Sequence:
NC_020407.1 (2338475..2339698)

NC_020407.1Genomic Context describing neighboring genes Neighboring gene tetQ family GTPase Neighboring gene methyltransferase Neighboring gene ATP synthase beta chain mitochondrial precursor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020407.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cobalt ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine hydroxymethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in folic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tetrahydrofolate interconversion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
serine hydroxymethyltransferase
XP_004225131.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020407.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004225083.1 → XP_004225131.1  serine hydroxymethyltransferase, partial [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004225131.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UZ26
    Conserved Domains (2) summary
    cd00378
    Location:1 → 400
    SHMT; Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl ...
    PTZ00094
    Location:1 → 407
    PTZ00094; serine hydroxymethyltransferase; Provisional
Nucleotide Protein
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