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sqv-8 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8 [ Caenorhabditis elegans ]

Gene ID: 174517, updated on 11-Apr-2024

Summary

Gene symbol
sqv-8
Gene description
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8
Primary source
WormBase:WBGene00005026
Locus tag
CELE_ZK1307.5
See related
AllianceGenome:WB:WBGene00005026
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables glucuronosyltransferase activity. Involved in several processes, including chondroitin sulfate biosynthetic process; oviposition; and pharynx development. Located in membrane. Human ortholog(s) of this gene implicated in Barrett's esophagus; Larsen-like syndrome B3GAT3 type; and schizophrenia. Orthologous to several human genes including B3GAT3 (beta-1,3-glucuronyltransferase 3). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See sqv-8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (9647878..9649367)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Glucosidase 2 subunit beta Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Anaphase-promoting complex subunit 4-like WD40 domain-containing protein Neighboring gene Coiled-coil domain-containing protein 130 homolog Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables glucuronosyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in chondroitin sulfate biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in egg-laying behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryo development ending in birth or egg hatching IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in morphogenesis of an epithelium IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in pharynx development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in reproductive process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatid development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vulval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8
NP_496076.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9647878..9649367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063675.6NP_496076.1  Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase sqv-8 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496076.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09363
    Conserved Domains (2) summary
    cd00218
    Location:97327
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
    cl11433
    Location:1586
    DivIC; Septum formation initiator