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prmn-1 PRoMiNin (5-transmembrane domain glycoprotein) homolog [ Caenorhabditis elegans ]

Gene ID: 181330, updated on 4-Jan-2025

Summary

Official Symbol
prmn-1
Official Full Name
PRoMiNin (5-transmembrane domain glycoprotein) homolog
Primary source
WormBase:WBGene00008571
Locus tag
CELE_F08B12.1
See related
AllianceGenome:WB:WBGene00008571
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 12; retinal macular dystrophy 2; and retinitis pigmentosa 41. Orthologous to human PROM1 (prominin 1) and PROM2 (prominin 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See prmn-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
20
Sequence:
Chromosome: X; NC_003284.9 (11385084..11392776)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Peroxisome assembly protein 12 Neighboring gene Ion_trans_2 domain-containing protein Neighboring gene ncRNA

General gene information

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane  

General protein information

Preferred Names
PRoMiNin (5-transmembrane domain glycoprotein) homolog
NP_509907.1
  • Product from WormBase gene class prmn;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    11385084..11392776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077506.6NP_509907.1  PRoMiNin (5-transmembrane domain glycoprotein) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509907.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19188
    Conserved Domains (2) summary
    pfam05478
    Location:13816
    Prominin; Prominin
    cl23720
    Location:686763
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
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