U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 [ Mus musculus (house mouse) ]

Gene ID: 18788, updated on 12-May-2024

Summary

Official Symbol
Serpinb2provided by MGI
Official Full Name
serine (or cysteine) peptidase inhibitor, clade B, member 2provided by MGI
Primary source
MGI:MGI:97609
See related
Ensembl:ENSMUSG00000062345 AllianceGenome:MGI:97609
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PAI-2; Planh2; ovalbumin
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity and wound healing. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in cytoplasm and extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including genitourinary system; immune system; mesothelium; respiratory system; and skin. Orthologous to human SERPINB2 (serpin family B member 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver E14 (RPKM 1.2), liver E14.5 (RPKM 1.0) and 14 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Serpinb2 in Genome Data Viewer
Location:
1 E2.1; 1 50.34 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (107439153..107453330)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (107500892..107525600)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 7 Neighboring gene STARR-positive B cell enhancer mm9_chr1:109342973-109343273 Neighboring gene STARR-positive B cell enhancer mm9_chr1:109343789-109344089 Neighboring gene predicted gene, 24553 Neighboring gene STARR-seq mESC enhancer starr_01868 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10 Neighboring gene SCAN domain containing 3 pseudogene Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables peptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of endopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within negative regulation of peptidase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cornified envelope IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
plasminogen activator inhibitor 2, macrophage
Names
plasminogen activator inhibitor, type II
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2
serine (or cysteine) proteinase inhibitor, clade B, member 2
serpin B2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001174170.1NP_001167641.1  plasminogen activator inhibitor 2, macrophage

    See identical proteins and their annotated locations for NP_001167641.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants encode the same protein.
    Source sequence(s)
    AI847983, AK081487
    Consensus CDS
    CCDS15219.1
    UniProtKB/Swiss-Prot
    O35687, P12388, Q9QWP6, Q9QWP7, Q9QWP8, Q9QWP9, Q9QWQ0, Q9QWZ5, Q9QWZ6
    UniProtKB/TrEMBL
    Q542A3
    Related
    ENSMUSP00000009356.5, ENSMUST00000009356.11
    Conserved Domains (1) summary
    cl00137
    Location:4415
    SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...
  2. NM_011111.4NP_035241.1  plasminogen activator inhibitor 2, macrophage

    See identical proteins and their annotated locations for NP_035241.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants encode the same protein.
    Source sequence(s)
    AI847983, AK090049, BY195599
    Consensus CDS
    CCDS15219.1
    UniProtKB/Swiss-Prot
    O35687, P12388, Q9QWP6, Q9QWP7, Q9QWP8, Q9QWP9, Q9QWQ0, Q9QWZ5, Q9QWZ6
    UniProtKB/TrEMBL
    Q542A3
    Related
    ENSMUSP00000065277.3, ENSMUST00000064916.9
    Conserved Domains (1) summary
    cl00137
    Location:4415
    SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    107439153..107453330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)