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Sprr2j-ps small proline-rich protein 2J, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 20764, updated on 8-Feb-2024

Summary

Official Symbol
Sprr2j-psprovided by MGI
Official Full Name
small proline-rich protein 2J, pseudogeneprovided by MGI
Primary source
MGI:MGI:1330345
See related
Ensembl:ENSMUSG00000027925 AllianceGenome:MGI:1330345
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sprr2j
Expression
Restricted expression toward stomach adult (RPKM 8.3) See more
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Genomic context

Location:
3 F1; 3 40.14 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92325394..92326703)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92418087..92419396)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2H Neighboring gene small proline-rich protein 2I Neighboring gene adhesion regulating molecule 1B Neighboring gene small proline-rich protein 2K

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003185.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK019074
    Related
    ENSMUST00000029533.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    92325394..92326703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)