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Rimbp2 RIMS binding protein 2 [ Mus musculus (house mouse) ]

Gene ID: 231760, updated on 21-Apr-2024

Summary

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Official Symbol
Rimbp2provided by MGI
Official Full Name
RIMS binding protein 2provided by MGI
Primary source
MGI:MGI:2443235
See related
Ensembl:ENSMUSG00000029420 AllianceGenome:MGI:2443235
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mKIAA0318; A930033C01Rik
Summary
Predicted to be involved in neuromuscular synaptic transmission. Located in presynaptic active zone cytoplasmic component. Orthologous to human RIMBP2 (RIMS binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in cortex adult (RPKM 19.2), frontal lobe adult (RPKM 17.0) and 5 other tissues See more
Orthologs
human all
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Genomic context

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Location:
5 G1.3; 5 67.91 cM
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (128834852..129030636, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (128757788..128953644, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_14427 Neighboring gene predicted gene, 33995 Neighboring gene piwi-like RNA-mediated gene silencing 1 Neighboring gene predicted gene 42875 Neighboring gene predicted gene, 34057 Neighboring gene syntaxin 2 Neighboring gene RAN, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. RIM-Binding Protein 2 Organizes Ca(2+) Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central Synapse. Butola T, et al. J Neurosci, 2021 Sep 15. PMID 34353898, Free PMC Article
  2. RBP2 stabilizes slow Cav1.3 Ca(2+) channel inactivation properties of cochlear inner hair cells. Ortner NJ, et al. Pflugers Arch, 2020 Jan. PMID 31848688, Free PMC Article
  3. RIM-BP2 primes synaptic vesicles via recruitment of Munc13-1 at hippocampal mossy fiber synapses. Brockmann MM, et al. Elife, 2019 Sep 19. PMID 31535974, Free PMC Article
  4. RIM-binding proteins recruit BK-channels to presynaptic release sites adjacent to voltage-gated Ca(2+)-channels. Sclip A, et al. EMBO J, 2018 Aug 15. PMID 29967030, Free PMC Article
  5. RIM-binding protein 2 regulates release probability by fine-tuning calcium channel localization at murine hippocampal synapses. Grauel MK, et al. Proc Natl Acad Sci U S A, 2016 Oct 11. PMID 27671655, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RIM-BP2 regulates Ca[2+] channel abundance and neurotransmitter release at hippocampal mossy fiber terminals.
    Title: RIM-BP2 regulates Ca(2+) channel abundance and neurotransmitter release at hippocampal mossy fiber terminals.
  2. RIM-Binding Protein 2 Organizes Ca(2+) Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central Synapse.
    Title: RIM-Binding Protein 2 Organizes Ca(2+) Channel Topography and Regulates Release Probability and Vesicle Replenishment at a Fast Central Synapse.
  3. RBP2 stabilizes slow Cav1.3 Ca(2+) channel inactivation properties of cochlear inner hair cells.
    Title: RBP2 stabilizes slow Cav1.3 Ca(2+) channel inactivation properties of cochlear inner hair cells.
  4. At hippocampal mossy fiber synapses, RIM-BP2 has a substantial impact on neurotransmitter release by promoting vesicle docking/priming and vesicular release probability via stabilization of Munc13-1 at the active zone.
    Title: RIM-BP2 primes synaptic vesicles via recruitment of Munc13-1 at hippocampal mossy fiber synapses.
  5. Rimbp2 is identified in mouse.
    Title: Structure and evolution of RIM-BP genes: identification of a novel family member.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of presynaptic active zone IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of presynaptic active zone IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels IDA
Inferred from Direct Assay
more info
 PubMed 
enables voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential IDA
Inferred from Direct Assay
more info
 PubMed 
enables voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of calcium-dependent activation of synaptic vesicle fusion IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of calcium-dependent activation of synaptic vesicle fusion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of presynaptic membrane potential IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of presynaptic membrane potential IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in calyx of Held IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in calyx of Held IMP
Inferred from Mutant Phenotype
more info
 PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in glutamatergic synapse IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in presynaptic active zone cytoplasmic component IDA
Inferred from Direct Assay
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RIMS-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081388.2 → NP_001074857.1  RIMS-binding protein 2 isoform 1

    See identical proteins and their annotated locations for NP_001074857.1

    Status: VALIDATED

    Source sequence(s)
    AK038814, AK044685, AK147417, BC151100, BP762839, CF745262, CJ115058
    Consensus CDS
    CCDS39288.1
    UniProtKB/Swiss-Prot
    B9EKT4, E9QPF5, Q80U40
    UniProtKB/TrEMBL
    D3YXR8
    Related
    ENSMUSP00000106978.2, ENSMUST00000111346.6
    Conserved Domains (6) summary
    cd12012
    Location:879 → 940
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:983 → 1043
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:414 → 478
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin; Kisspeptin

  2. NM_001310733.1 → NP_001297662.1  RIMS-binding protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC111089, AK044685, AK147417, BC151100, BP762839, CF745262, CJ115058
    Consensus CDS
    CCDS80415.1
    UniProtKB/Swiss-Prot
    B9EKT4, E9QPF5, Q80U40
    UniProtKB/TrEMBL
    A0A0G2JFB0
    Related
    ENSMUSP00000143099.2, ENSMUST00000200470.5
    Conserved Domains (8) summary
    cd12012
    Location:872 → 933
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:976 → 1036
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:501 → 587
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:407 → 471
    fn3; Fibronectin type III domain
    pfam15152
    Location:637 → 678
    Kisspeptin; Kisspeptin
    cd16269
    Location:56 → 70
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:1 → 88
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. NM_001378900.1 → NP_001365829.1  RIMS-binding protein 2 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC110566, AC111089, AC116715
    UniProtKB/Swiss-Prot
    B9EKT4, E9QPF5, Q80U40
    Conserved Domains (8) summary
    cd12012
    Location:872 → 933
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:976 → 1036
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:314 → 391
    FN3; Fibronectin type 3 domain
    PHA03321
    Location:586 → 730
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:501 → 587
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:407 → 474
    fn3; Fibronectin type III domain
    pfam15905
    Location:4 → 88
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    128834852..129030636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017320870.3 → XP_017176359.1  RIMS-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (8) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin

  2. XM_006504296.4 → XP_006504359.1  RIMS-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (8) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin

  3. XM_006504297.5 → XP_006504360.1  RIMS-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (9) summary
    cd12012
    Location:1109 → 1170
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1213 → 1273
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:314 → 391
    FN3; Fibronectin type 3 domain
    PHA03321
    Location:586 → 730
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:501 → 587
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:407 → 474
    fn3; Fibronectin type III domain
    pfam15152
    Location:637 → 678
    Kisspeptin
    pfam15905
    Location:8 → 88
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  4. XM_006504288.5 → XP_006504351.1  RIMS-binding protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006504351.1

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (7) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain

  5. XM_006504295.5 → XP_006504358.1  RIMS-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (7) summary
    cd12012
    Location:1067 → 1128
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1171 → 1231
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin

  6. XM_006504289.5 → XP_006504352.1  RIMS-binding protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006504352.1

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (7) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain

  7. XM_006504293.4 → XP_006504356.1  RIMS-binding protein 2 isoform X2

    See identical proteins and their annotated locations for XP_006504356.1

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (9) summary
    cd12012
    Location:1109 → 1170
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1213 → 1273
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:314 → 391
    FN3; Fibronectin type 3 domain
    PHA03321
    Location:586 → 730
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:501 → 587
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:407 → 474
    fn3; Fibronectin type III domain
    pfam15152
    Location:637 → 678
    Kisspeptin
    pfam15905
    Location:8 → 88
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  8. XM_030254432.1 → XP_030110292.1  RIMS-binding protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A0G2JGW5
    Related
    ENSMUSP00000143725.2, ENSMUST00000196085.5
    Conserved Domains (8) summary
    cd12012
    Location:830 → 891
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:934 → 994
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 709
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin

  9. XM_017320871.2 → XP_017176360.1  RIMS-binding protein 2 isoform X7

    UniProtKB/Swiss-Prot
    B9EKT4, E9QPF5, Q80U40
    Conserved Domains (9) summary
    cd12012
    Location:879 → 940
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:983 → 1043
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:321 → 398
    FN3; Fibronectin type 3 domain
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain
    pfam15152
    Location:644 → 685
    Kisspeptin

  10. XM_036165094.1 → XP_036020987.1  RIMS-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (7) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain

  11. XM_006504294.5 → XP_006504357.1  RIMS-binding protein 2 isoform X2

    See identical proteins and their annotated locations for XP_006504357.1

    UniProtKB/TrEMBL
    A0A571BDA2
    Related
    ENSMUSP00000158659.2, ENSMUST00000238334.2
    Conserved Domains (9) summary
    cd12012
    Location:1109 → 1170
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1213 → 1273
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:185 → 245
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    smart00060
    Location:314 → 391
    FN3; Fibronectin type 3 domain
    PHA03321
    Location:586 → 730
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:501 → 587
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:407 → 474
    fn3; Fibronectin type III domain
    pfam15152
    Location:637 → 678
    Kisspeptin
    pfam15905
    Location:8 → 88
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  12. XM_011240839.4 → XP_011239141.1  RIMS-binding protein 2 isoform X1

    See identical proteins and their annotated locations for XP_011239141.1

    UniProtKB/TrEMBL
    A0A571BDA2
    Conserved Domains (7) summary
    cd12012
    Location:1116 → 1177
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1220 → 1280
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:192 → 252
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03321
    Location:593 → 737
    PHA03321; tegument protein VP11/12; Provisional
    cd00063
    Location:508 → 594
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02168
    Location:2 → 87
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam00041
    Location:414 → 481
    fn3; Fibronectin type III domain

RNA

  1. XR_377055.5 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q80U40.3 GenPept UniProtKB/Swiss-Prot:Q80U40

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