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Tshr thyroid stimulating hormone receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 25360, updated on 13-Apr-2024

Summary

Official Symbol
Tshrprovided by RGD
Official Full Name
thyroid stimulating hormone receptorprovided by RGD
Primary source
RGD:3911
See related
Ensembl:ENSRNOG00000003972 AllianceGenome:RGD:3911
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
TSHRA
Summary
Enables thyroid-stimulating hormone receptor activity. Involved in positive regulation of cell population proliferation. Located in membrane raft. Human ortholog(s) of this gene implicated in Graves' disease; cardiomyopathy; congenital nongoitrous hypothyroidism 1; and mitral valve prolapse. Orthologous to human TSHR (thyroid stimulating hormone receptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 17.6), Lung (RPKM 14.5) and 8 other tissues See more
Orthologs
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Genomic context

Location:
6q31
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (116072321..116206009)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (110341585..110475297)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (115170290..115306871)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479243 Neighboring gene centrosomal protein 128 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene general transcription factor 2A subunit 1 Neighboring gene uncharacterized LOC134479244 Neighboring gene stonin 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables signaling receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables thyroid-stimulating hormone receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thyroid-stimulating hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables thyroid-stimulating hormone receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables thyroid-stimulating hormone receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables thyroid-stimulating hormone receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within B cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in activation of adenylate cyclase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within adenylate cyclase-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within adult locomotory behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in cell surface receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cell surface receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to glycoprotein ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to glycoprotein ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to thyrotropin-releasing hormone ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to thyrotropin-releasing hormone ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within cochlea morphogenesis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within dopaminergic neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in hormone-mediated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within inner ear receptor cell development ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within inner ear receptor cell stereocilium organization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of cold-induced thermogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cold-induced thermogenesis ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
acts_upstream_of_or_within positive regulation of multicellular organism growth ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of locomotion ISO
Inferred from Sequence Orthology
more info
 
involved_in thyroid-stimulating hormone signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in thyroid-stimulating hormone signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in thyroid-stimulating hormone signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in lateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
thyrotropin receptor
Names
TSH-R

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012888.2NP_037020.2  thyrotropin receptor precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000006
    UniProtKB/Swiss-Prot
    P21463
    UniProtKB/TrEMBL
    A6JEC7, G3V6J1
    Related
    ENSRNOP00000005671.2, ENSRNOT00000005671.5
    Conserved Domains (3) summary
    sd00033
    Location:5477
    LRR_RI; leucine-rich repeat [structural motif]
    cd15964
    Location:415689
    7tmA_TSH-R; thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family of seven-transmembrane G protein-coupled receptors
    pfam13306
    Location:65221
    LRR_5; Leucine rich repeats (6 copies)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    116072321..116206009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039111802.2XP_038967730.2  thyrotropin receptor isoform X1