U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IGKV2D-10 immunoglobulin kappa variable 2D-10 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 28890, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
IGKV2D-10provided by HGNC
Official Full Name
immunoglobulin kappa variable 2D-10 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:5792
See related
IMGT/GENE-DB:IGKV2D-10; AllianceGenome:HGNC:5792
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
L21; IGKV2D10
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See IGKV2D-10 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (90179890..90180655)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (90735463..90736228)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (90218731..90219496)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene immunoglobulin kappa variable 1D-12 Neighboring gene immunoglobulin kappa variable 3D-11 Neighboring gene immunoglobulin kappa variable 1D-42 (non-functional) Neighboring gene immunoglobulin kappa variable 1D-43

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A large section of the gene locus encoding human immunoglobulin variable regions of the kappa type is duplicated. Pech M, et al. J Mol Biol, 1985 Jun 5. PMID 3927006
  2. The V kappa genes of the L regions and the repertoire of V kappa gene sequences in the human germ line. Huber C, et al. Eur J Immunol, 1993 Nov. PMID 8223863
  3. Evolutionary dynamics of the human immunoglobulin kappa locus and the germline repertoire of the Vkappa genes. Kawasaki K, et al. Eur J Immunol, 2001 Apr. PMID 11298326

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000833.2 

    Range
    68170..68935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    90179890..90180655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    90735463..90736228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials