U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ankrd45 ankyrin repeat domain 45 [ Rattus norvegicus (Norway rat) ]

Gene ID: 289152, updated on 13-Apr-2024

Summary

Go to the top of the page Help
Symbol
Ankrd45provided by RGD
Full Name
ankyrin repeat domain 45provided by RGD
Primary source
RGD:1311153
See related
Ensembl:ENSRNOG00000002890 AllianceGenome:RGD:1311153
Gene type
protein coding
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1311153
Summary
Orthologous to human ANKRD45 (ankyrin repeat domain 45). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 53.4), Adrenal (RPKM 26.2) and 7 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Ankrd45 in Genome Data Viewer
Location:
13q22
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (75957047..75984868)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (73424766..73450466)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (78973578..79000356)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S10-like Neighboring gene kelch-like family member 20 Neighboring gene uncharacterized LOC134481580 Neighboring gene Cytochrome c oxidase subunit 7C, pseudogene 1 Neighboring gene testis expressed 50 Neighboring gene solute carrier family 9, member C2 (putative) Neighboring gene uncharacterized LOC102552207 Neighboring gene peroxiredoxin 6 Neighboring gene actin, gamma 1, pseudogene 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cell population proliferation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cleavage furrow ISO
Inferred from Sequence Orthology
more info
  
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in midbody ISO
Inferred from Sequence Orthology
more info
  

General protein information

Go to the top of the page Help
Preferred Names
ankyrin repeat domain-containing protein 45

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001402391.1 → NP_001389320.1  ankyrin repeat domain-containing protein 45

    Status: INFERRED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    A0A8I6AKU5
    Related
    ENSRNOP00000095931.1, ENSRNOT00000104700.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    75957047..75984868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063272105.1 → XP_063128175.1  ankyrin repeat domain-containing protein 45 isoform X1

  2. XM_063272107.1 → XP_063128177.1  ankyrin repeat domain-containing protein 45 isoform X2

  3. XM_063272113.1 → XP_063128183.1  ankyrin repeat domain-containing protein 45 isoform X4

  4. XM_063272112.1 → XP_063128182.1  ankyrin repeat domain-containing protein 45 isoform X3

  5. XM_063272114.1 → XP_063128184.1  ankyrin repeat domain-containing protein 45 isoform X5

  6. XM_063272110.1 → XP_063128180.1  ankyrin repeat domain-containing protein 45 isoform X2

  7. XM_063272115.1 → XP_063128185.1  ankyrin repeat domain-containing protein 45 isoform X6

    UniProtKB/TrEMBL
    A0A8I6AKU5

  8. XM_063272108.1 → XP_063128178.1  ankyrin repeat domain-containing protein 45 isoform X2

  9. XM_063272106.1 → XP_063128176.1  ankyrin repeat domain-containing protein 45 isoform X2

  10. XM_063272111.1 → XP_063128181.1  ankyrin repeat domain-containing protein 45 isoform X2

  11. XM_063272109.1 → XP_063128179.1  ankyrin repeat domain-containing protein 45 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.