U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ccdc121rt1 coiled-coil domain containing 121, retrogene 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 289329, updated on 13-Apr-2024

Summary

Official Symbol
Ccdc121rt1provided by RGD
Official Full Name
coiled-coil domain containing 121, retrogene 1provided by RGD
Primary source
RGD:1566190
See related
Ensembl:ENSRNOG00000022717 AllianceGenome:RGD:1566190
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ccdc121; Ccdc121rt; RGD1566190
Summary
Orthologous to human CCDC121 (coiled-coil domain containing 121). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Ccdc121rt1 in Genome Data Viewer
Location:
13q26
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (95785468..95787135, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (93253752..93255419, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (99819380..99821055, complement)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 26 Neighboring gene glutamic acid-rich protein-like Neighboring gene cornichon family AMPA receptor auxiliary protein 3 Neighboring gene dynein axonemal heavy chain 14 Neighboring gene mitochondrial ribosomal protein S11, pseudogene 1 Neighboring gene lamin B receptor

Genomic regions, transcripts, and products

General protein information

Preferred Names
coiled-coil domain containing 121, retrotransposed
Names
coiled-coil domain-containing protein 121-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001408779.1NP_001395708.1  coiled-coil domain containing 121, retrotransposed

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    F1LTT6
    Related
    ENSRNOP00000036570.5, ENSRNOT00000036629.6

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    95785468..95787135 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)