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Kiaa0825 KIAA0825 homolog [ Rattus norvegicus (Norway rat) ]

Gene ID: 294603, updated on 13-Apr-2024

Summary

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Official Symbol
Kiaa0825provided by RGD
Official Full Name
KIAA0825 homologprovided by RGD
Primary source
RGD:1560883
See related
Ensembl:ENSRNOG00000045639 AllianceGenome:RGD:1560883
Gene type
protein coding
RefSeq status
INFERRED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1560883
Summary
Orthologous to human KIAA0825 (KIAA0825). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 41.0), Adrenal (RPKM 21.7) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Kiaa0825 in Genome Data Viewer
Location:
2q11
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (8606257..9167308)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (6874474..7437032)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (4195871..4755065)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene multiple C2 and transmembrane domain containing 1 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 9 Neighboring gene uncharacterized LOC134485566 Neighboring gene ribosomal protein L17, pseudogene 12 Neighboring gene SMC5-SMC6 complex localization factor 1 Neighboring gene ribosomal protein L35, pseudogene 3 Neighboring gene mRNA turnover protein 4 homolog Neighboring gene ARB2 cotranscriptional regulator A Neighboring gene RNA, U6 small nuclear 259 Neighboring gene POU domain class 5, transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein KIAA0825 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419450.1 → NP_001406379.1  uncharacterized protein KIAA0825 homolog

    Status: INFERRED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/TrEMBL
    M0R647
    Related
    ENSRNOP00000064885.2, ENSRNOT00000071535.2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    8606257..9167308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017591153.3 → XP_017446642.1  uncharacterized protein KIAA0825 homolog isoform X1

  2. XM_017591158.3 → XP_017446647.1  uncharacterized protein KIAA0825 homolog isoform X4

  3. XM_063281463.1 → XP_063137533.1  uncharacterized protein KIAA0825 homolog isoform X6

  4. XM_017591156.3 → XP_017446645.1  uncharacterized protein KIAA0825 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8I6G599
    Related
    ENSRNOP00000079404.1

  5. XM_063281464.1 → XP_063137534.1  uncharacterized protein KIAA0825 homolog isoform X7

  6. XM_063281461.1 → XP_063137531.1  uncharacterized protein KIAA0825 homolog isoform X5

    UniProtKB/TrEMBL
    A0A1W2Q691

  7. XM_063281466.1 → XP_063137536.1  uncharacterized protein KIAA0825 homolog isoform X10

  8. XM_039103953.2 → XP_038959881.1  uncharacterized protein KIAA0825 homolog isoform X15

    Conserved Domains (1) summary
    pfam14906
    Location:545 → 780
    DUF4495; Domain of unknown function (DUF4495)

  9. XM_063281468.1 → XP_063137538.1  uncharacterized protein KIAA0825 homolog isoform X14

  10. XM_017591157.3 → XP_017446646.1  uncharacterized protein KIAA0825 homolog isoform X3

  11. XM_063281467.1 → XP_063137537.1  uncharacterized protein KIAA0825 homolog isoform X11

  12. XM_063281465.1 → XP_063137535.1  uncharacterized protein KIAA0825 homolog isoform X8

  13. XM_063281469.1 → XP_063137539.1  uncharacterized protein KIAA0825 homolog isoform X17

  14. XM_063281460.1 → XP_063137530.1  uncharacterized protein KIAA0825 homolog isoform X3

  15. XM_017591155.3 → XP_017446644.1  uncharacterized protein KIAA0825 homolog isoform X1

  16. XM_039103950.2 → XP_038959878.1  uncharacterized protein KIAA0825 homolog isoform X9

    Conserved Domains (1) summary
    pfam14906
    Location:433 → 749
    DUF4495; Domain of unknown function (DUF4495)

  17. XM_039103951.2 → XP_038959879.1  uncharacterized protein KIAA0825 homolog isoform X12

    Conserved Domains (1) summary
    pfam14906
    Location:215 → 531
    DUF4495; Domain of unknown function (DUF4495)

  18. XM_039103952.2 → XP_038959880.1  uncharacterized protein KIAA0825 homolog isoform X13

    Conserved Domains (1) summary
    pfam14906
    Location:157 → 473
    DUF4495; Domain of unknown function (DUF4495)

  19. XM_039103954.2 → XP_038959882.1  uncharacterized protein KIAA0825 homolog isoform X16

    Conserved Domains (1) summary
    pfam14906
    Location:33 → 239
    DUF4495; Domain of unknown function (DUF4495)

RNA

  1. XR_005501450.2 RNA Sequence

  2. XR_005501452.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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