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Rxfp1 relaxin family peptide receptor 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 295144, updated on 2-May-2024

Summary

Official Symbol
Rxfp1provided by RGD
Official Full Name
relaxin family peptide receptor 1provided by RGD
Primary source
RGD:1302973
See related
Ensembl:ENSRNOG00000024120 AllianceGenome:RGD:1302973
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Lgr7
Summary
Enables G protein-coupled receptor activity. Involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human RXFP1 (relaxin family peptide receptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Uterus (RPKM 123.6), Heart (RPKM 37.6) and 1 other tissue See more
Orthologs
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Genomic context

Location:
2q33
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (167070414..167191616, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (164772270..164893484, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (178402411..178520213, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene electron transfer flavoprotein dehydrogenase Neighboring gene similar to human chromosome 4 open reading frame 46 Neighboring gene uncharacterized LOC108350043 Neighboring gene transmembrane protein 144 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables G protein-coupled receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables hormone binding IEA
Inferred from Electronic Annotation
more info
 
enables hormone binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in activation of adenylate cyclase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within adenylate cyclase-modulating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within extracellular matrix organization ISO
Inferred from Sequence Orthology
more info
 
involved_in hormone-mediated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lung connective tissue development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lung connective tissue development ISO
Inferred from Sequence Orthology
more info
 
involved_in myofibroblast differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within myofibroblast differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in nipple morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within nipple morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in parturition IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within parturition ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
relaxin receptor 1
Names
leucine-rich repeat-containing G-protein coupled receptor 7
relaxin/insulin-like family peptide receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_201417.2NP_958820.2  relaxin receptor 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    Related
    ENSRNOP00000081726.1, ENSRNOT00000101813.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    167070414..167191616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006232508.5XP_006232570.1  relaxin receptor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8I5ZVM0
    Conserved Domains (5) summary
    cd00112
    Location:3368
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00116
    Location:138356
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:134157
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00001
    Location:427686
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    pfam13855
    Location:158216
    LRR_8; Leucine rich repeat
  2. XM_039102022.2XP_038957950.1  relaxin receptor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I5ZVM0
    Conserved Domains (6) summary
    cd00112
    Location:3368
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    sd00033
    Location:134157
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:278337
    LRR_8; Leucine rich repeat
    cd14964
    Location:413439
    7tm_GPCRs; TM helix 1 [structural motif]
    cd21340
    Location:117287
    PPP1R42; protein phosphatase 1 regulatory subunit 42
    cl28897
    Location:412698
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  3. XM_039102024.2XP_038957952.1  relaxin receptor 1 isoform X3

    UniProtKB/TrEMBL
    A6J5S4, F1M7X9
    Conserved Domains (5) summary
    sd00033
    Location:222
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:191244
    LRR_8; Leucine rich repeat
    cd14964
    Location:278304
    7tm_GPCRs; TM helix 1 [structural motif]
    cd21340
    Location:2205
    PPP1R42; protein phosphatase 1 regulatory subunit 42
    cl28897
    Location:277563
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily