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Miga2 mitoguardin 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 296623, updated on 13-Apr-2024

Summary

Official Symbol
Miga2provided by RGD
Official Full Name
mitoguardin 2provided by RGD
Primary source
RGD:1310887
See related
Ensembl:ENSRNOG00000017513 AllianceGenome:RGD:1310887
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Fam73b; RGD1310887
Summary
Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in mitochondrial fusion. Predicted to act upstream of or within bone development. Predicted to be integral component of plasma membrane. Orthologous to human MIGA2 (mitoguardin 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 165.3), Adrenal (RPKM 138.7) and 9 other tissues See more
Orthologs
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Genomic context

See Miga2 in Genome Data Viewer
Location:
3p12
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (34034018..34056703)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (13636235..13658895)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (8928484..8951189)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 188 Neighboring gene SH3 domain-containing GRB2-like endophilin B2 Neighboring gene ribosomal protein L38 like 5 Neighboring gene U2 spliceosomal RNA Neighboring gene dolichyldiphosphatase 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within bone development ISO
Inferred from Sequence Orthology
more info
 
involved_in mitochondrial fusion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial fusion ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitoguardin 2
Names
family with sequence similarity 73, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106566.2NP_001100036.1  mitoguardin 2 isoform 2

    See identical proteins and their annotated locations for NP_001100036.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A6JTY2, D3Z899
    Related
    ENSRNOP00000062428.1, ENSRNOT00000065300.4
    Conserved Domains (1) summary
    pfam10265
    Location:31529
    DUF2217; Uncharacterized conserved protein (DUF2217)
  2. NM_001399326.1NP_001386255.1  mitoguardin 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A0A0G2KAE6, A6JTY1
    Related
    ENSRNOP00000075370.1, ENSRNOT00000088509.2
    Conserved Domains (1) summary
    pfam10265
    Location:31568
    Miga; Mitoguardin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    34034018..34056703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063283490.1XP_063139560.1  mitoguardin 2 isoform X2

  2. XM_006233782.4XP_006233844.1  mitoguardin 2 isoform X1

    See identical proteins and their annotated locations for XP_006233844.1

    UniProtKB/TrEMBL
    A0A0G2KAE6, A6JTY1
    Conserved Domains (1) summary
    pfam10265
    Location:31568
    Miga; Mitoguardin

RNA

  1. XR_010064604.1 RNA Sequence