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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001427255.1 → NP_001414184.1 sushi domain-containing protein 1 precursor
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000005
- UniProtKB/TrEMBL
-
A0A0G2JTG3
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086023.1 Reference GRCr8
- Range
-
78952781..79076121 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006238212.5 → XP_006238274.1 sushi domain-containing protein 1 isoform X3
See identical proteins and their annotated locations for XP_006238274.1
- UniProtKB/TrEMBL
-
A0A0G2JTG3
- Conserved Domains (3) summary
-
- cd00033
Location:149 → 205
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:95 → 126
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:12 → 39
- EGF_3; EGF domain
-
XM_039111047.2 → XP_038966975.1 sushi domain-containing protein 1 isoform X4
- UniProtKB/TrEMBL
-
A0A0G2JTG3
- Conserved Domains (2) summary
-
- cd00033
Location:146 → 202
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:92 → 123
- EGF_CA; Calcium-binding EGF-like domain
-
XM_039111048.2 → XP_038966976.1 sushi domain-containing protein 1 isoform X6
- Conserved Domains (3) summary
-
- cd00033
Location:131 → 186
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:76 → 114
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_039111046.2 → XP_038966974.1 sushi domain-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
A0A0G2JTG3
- Conserved Domains (3) summary
-
- cd00033
Location:233 → 288
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_006238211.5 → XP_006238273.1 sushi domain-containing protein 1 isoform X1
See identical proteins and their annotated locations for XP_006238273.1
- UniProtKB/TrEMBL
-
A0A0G2JTG3
- Conserved Domains (3) summary
-
- cd00033
Location:182 → 238
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_006238213.5 → XP_006238275.1 sushi domain-containing protein 1 isoform X5
See identical proteins and their annotated locations for XP_006238275.1
- Conserved Domains (3) summary
-
- cd00033
Location:182 → 237
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_039111049.2 → XP_038966977.1 sushi domain-containing protein 1 isoform X7
- Conserved Domains (2) summary
-
- cd00033
Location:66 → 122
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:12 → 43
- EGF_CA; Calcium-binding EGF-like domain
-
XM_039111050.2 → XP_038966978.1 sushi domain-containing protein 1 isoform X8
- Conserved Domains (3) summary
-
- cd00033
Location:182 → 238
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_039111051.2 → XP_038966979.1 sushi domain-containing protein 1 isoform X9
- Conserved Domains (3) summary
-
- cd00033
Location:182 → 238
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
-
XM_039111052.2 → XP_038966980.1 sushi domain-containing protein 1 isoform X10
- Conserved Domains (3) summary
-
- cd00033
Location:182 → 238
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00179
Location:128 → 159
- EGF_CA; Calcium-binding EGF-like domain
- pfam12947
Location:45 → 72
- EGF_3; EGF domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001106650.1: Suppressed sequence
- Description
- NM_001106650.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: SUSD1 (GeneID:64420).