Vsig2 V-set and immunoglobulin domain containing 2 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Vsig2provided by RGD
Official Full Name: V-set and immunoglobulin domain containing 2provided by RGD
Primary source: RGD:1561274
See related: Ensembl:ENSRNOG00000033490 AllianceGenome:RGD:1561274
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1561274
Summary: Predicted to be integral component of membrane. Orthologous to human VSIG2 (V-set and immunoglobulin domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Lung (RPKM 10.6), Spleen (RPKM 9.8) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 8q22

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	8	NC_086026.1 (45438865..45443908)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	8	NC_051343.1 (37250107..37255150)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (40009691..40014734)

Chromosome 8 - NC_086026.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: V-set and immunoglobulin domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001106812.1 → NP_001100282.1 V-set and immunoglobulin domain-containing protein 2 precursor

See identical proteins and their annotated locations for NP_001100282.1

Status: PROVISIONAL

Source sequence(s)

CH474096

UniProtKB/TrEMBL

A6KRK7, D4ADY0

Related

ENSRNOP00000045465.3, ENSRNOT00000042679.4

Conserved Domains (3) summary

smart00409
Location:152 → 235

IG; Immunoglobulin

pfam07686
Location:32 → 143

V-set; Immunoglobulin V-set domain

cd00096
Location:25 → 29

Ig; Ig strand A [structural motif]