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Nat9 N-acetyltransferase 9 [ Rattus norvegicus (Norway rat) ]

Gene ID: 303669, updated on 3-Apr-2024

Summary

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Official Symbol
Nat9provided by RGD
Official Full Name
N-acetyltransferase 9provided by RGD
Primary source
RGD:1307096
See related
Ensembl:ENSRNOG00000003264 AllianceGenome:RGD:1307096
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1307096
Summary
Predicted to enable N-acetyltransferase activity. Predicted to be involved in protein acetylation. Predicted to be part of protein-containing complex. Orthologous to human NAT9 (N-acetyltransferase 9 (putative)). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 77.4), Thymus (RPKM 68.2) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Nat9 in Genome Data Viewer
Location:
10q32.1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (100921306..100926646, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (100422326..100427510, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (103730215..103737052, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene RAB37, member RAS oncogene family Neighboring gene Cd300 molecule-like family member F Neighboring gene NHERF family PDZ scaffold protein 1 Neighboring gene transmembrane protein 104 Neighboring gene uncharacterized LOC134480900 Neighboring gene glutamate ionotropic receptor NMDA type subunit 2C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
  
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
alpha/beta-tubulin-N-acetyltransferase 9
Names
N-acetyltransferase 9 (GCN5-related, putative)
NP_001128307.1
XP_006247776.1
XP_038942116.2
XP_063125299.1
XP_063125300.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001134835.1 → NP_001128307.1  alpha/beta-tubulin-N-acetyltransferase 9

    See identical proteins and their annotated locations for NP_001128307.1

    Status: PROVISIONAL

    Source sequence(s)
    BC158710
    UniProtKB/TrEMBL
    A0A8I5ZU60, A6HKK9, B0BN73
    Conserved Domains (1) summary
    pfam13302
    Location:14 → 161
    Acetyltransf_3; Acetyltransferase (GNAT) domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    100921306..100926646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063269229.1 → XP_063125299.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A8I5ZU60, A6HKK9, B0BN73

  2. XM_039086188.2 → XP_038942116.2  alpha/beta-tubulin-N-acetyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    F7FH79

  3. XM_006247714.5 → XP_006247776.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform X2

    See identical proteins and their annotated locations for XP_006247776.1

    UniProtKB/TrEMBL
    A0A8I5ZU60, A6HKK9, B0BN73
    Related
    ENSRNOP00000082020.1
    Conserved Domains (1) summary
    pfam13302
    Location:14 → 161
    Acetyltransf_3; Acetyltransferase (GNAT) domain

  4. XM_063269230.1 → XP_063125300.1  alpha/beta-tubulin-N-acetyltransferase 9 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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