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Rimbp3 RIMS binding protein 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 303785, updated on 13-Apr-2024

Summary

Official Symbol
Rimbp3provided by RGD
Official Full Name
RIMS binding protein 3provided by RGD
Primary source
RGD:1563657
See related
Ensembl:ENSRNOG00000030452 AllianceGenome:RGD:1563657
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563657
Summary
Predicted to enable benzodiazepine receptor binding activity. Predicted to be involved in fertilization and spermatid development. Predicted to be active in nucleus. Predicted to colocalize with manchette. Orthologous to several human genes including RIMBP3C (RIMS binding protein 3C). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Rimbp3 in Genome Data Viewer
Location:
11q23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (97288041..97293616, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (83783816..83789391, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (88033213..88039002, complement)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-kinase alpha Neighboring gene transmembrane protein 191C Neighboring gene HIC ZBTB transcriptional repressor 2 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene small nucleolar RNA SNORA51 Neighboring gene ubiquitin-conjugating enzyme E2L 3 Neighboring gene coiled-coil domain containing 116 Neighboring gene YdjC chitooligosaccharide deacetylase homolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables benzodiazepine receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in fertilization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fertilization ISO
Inferred from Sequence Orthology
more info
 
NOT involved_in neuromuscular synaptic transmission IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in spermatid development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in spermatid development ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
colocalizes_with manchette IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in manchette ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001408780.1NP_001395709.1  RIMS binding protein 3

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000011
    UniProtKB/TrEMBL
    D4A7Z1
    Related
    ENSRNOP00000054476.3, ENSRNOT00000051991.5

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    97288041..97293616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)