Cox19 cytochrome c oxidase assembly factor COX19 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cox19provided by RGD
Official Full Name: cytochrome c oxidase assembly factor COX19provided by RGD
Primary source: RGD:1305631
See related: AllianceGenome:RGD:1305631
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1305631
Summary: Predicted to be involved in cellular copper ion homeostasis and mitochondrial cytochrome c oxidase assembly. Predicted to be located in cytosol and mitochondrion. Predicted to be active in mitochondrial intermembrane space. Orthologous to human COX19 (cytochrome c oxidase assembly factor COX19). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Muscle (RPKM 88.6), Heart (RPKM 64.1) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 12q11

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	12	NC_086030.1 (20417389..20426868)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	12	NC_051347.1 (15303535..15313014)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	12	NC_005111.4 (17395624..17405103)

Chromosome 12 - NC_086030.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH133407 (e-PCR)
- UniSTS:216690

AU049646 (e-PCR)
- UniSTS:146092

AI454263 (e-PCR)
- UniSTS:226222

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in intracellular copper ion homeostasis	ISO Inferred from Sequence Orthology more info
involved_in mitochondrial cytochrome c oxidase assembly	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytosol	ISO Inferred from Sequence Orthology more info
is_active_in mitochondrial intermembrane space	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrial intermembrane space	ISO Inferred from Sequence Orthology more info
located_in mitochondrion	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: COX19 cytochrome c oxidase assembly homolog

Names: COX19 cytochrome c oxidase assembly factor; cytochrome c oxidase assembly homolog 19; cytochrome c oxidase assembly protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.