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Prr14l proline rich 14-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 305466, updated on 5-Mar-2024

Summary

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Official Symbol
Prr14lprovided by RGD
Official Full Name
proline rich 14-likeprovided by RGD
Primary source
RGD:1305469
See related
Ensembl:ENSRNOG00000048891 AllianceGenome:RGD:1305469
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1305469
Summary
Orthologous to human PRR14L (proline rich 14 like). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 135.7), Spleen (RPKM 120.5) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Prr14l in Genome Data Viewer
Location:
14q21
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (82094360..82160985)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (77869848..77937141)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (83226552..83293823)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 5, GATOR1 subcomplex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene ATP synthase subunit epsilon, mitochondrial-like Neighboring gene phosphatidylserine decarboxylase Neighboring gene SFI1 centrin binding protein Neighboring gene uncharacterized LOC134481863

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
protein PRR14L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    82094360..82160985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_223586.10 → XP_223586.5  protein PRR14L isoform X1

    See identical proteins and their annotated locations for XP_223586.5

    UniProtKB/TrEMBL
    A0A8I5Y6D9, M0RAJ5
    Conserved Domains (1) summary
    pfam15386
    Location:1853 → 1906
    Tantalus; Drosophila Tantalus-like

  2. XM_039092536.2 → XP_038948464.1  protein PRR14L isoform X2

    UniProtKB/TrEMBL
    A0A8I5Y6D9
    Conserved Domains (1) summary
    pfam15386
    Location:1829 → 1882
    Tantalus; Drosophila Tantalus-like

  3. XM_039092537.2 → XP_038948465.1  protein PRR14L isoform X3

    UniProtKB/TrEMBL
    A0A8I5Y6D9

  4. XM_039092538.2 → XP_038948466.1  protein PRR14L isoform X4

    UniProtKB/TrEMBL
    A0A8I5Y6D9
    Related
    ENSRNOP00000076818.1
    Conserved Domains (1) summary
    pfam15386
    Location:1725 → 1778
    Tantalus; Drosophila Tantalus-like

  5. XM_006251416.5 → XP_006251478.1  protein PRR14L isoform X1

    See identical proteins and their annotated locations for XP_006251478.1

    UniProtKB/TrEMBL
    A0A8I5Y6D9, M0RAJ5
    Related
    ENSRNOP00000066545.2
    Conserved Domains (1) summary
    pfam15386
    Location:1853 → 1906
    Tantalus; Drosophila Tantalus-like

  6. XM_063273843.1 → XP_063129913.1  protein PRR14L isoform X5

  7. XM_039092539.2 → XP_038948467.1  protein PRR14L isoform X6

    UniProtKB/TrEMBL
    A0A8I5Y6D9
    Conserved Domains (1) summary
    pfam15386
    Location:1647 → 1700
    Tantalus; Drosophila Tantalus-like

  8. XM_063273841.1 → XP_063129911.1  protein PRR14L isoform X5

  9. XM_063273842.1 → XP_063129912.1  protein PRR14L isoform X5

Nucleotide Protein Strain
Heading Accession and Version

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