NEW
Try the new Transcript table
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086037.1 Reference GRCr8
- Range
-
50161722..50176491
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_063278642.1 → XP_063134712.1 puratrophin-1 isoform X4
- UniProtKB/TrEMBL
-
D3ZQ60
-
XM_063278644.1 → XP_063134714.1 puratrophin-1 isoform X6
- UniProtKB/TrEMBL
- A0A8I5ZTC9, D3ZQ60
-
XM_063278645.1 → XP_063134715.1 puratrophin-1 isoform X7
- UniProtKB/TrEMBL
- A6IYP6, D3ZQ60
-
XM_039098213.2 → XP_038954141.1 puratrophin-1 isoform X4
- UniProtKB/TrEMBL
-
D3ZQ60
- Conserved Domains (3) summary
-
- cd00160
Location:705 → 871
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13242
Location:871 → 1006
- PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
- cl02488
Location:419 → 570
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_039098211.2 → XP_038954139.1 puratrophin-1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I5Y027
- Conserved Domains (3) summary
-
- cd00160
Location:749 → 915
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13242
Location:915 → 1050
- PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
- cl02488
Location:463 → 614
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_006255483.5 → XP_006255545.1 puratrophin-1 isoform X3
See identical proteins and their annotated locations for XP_006255545.1
- UniProtKB/TrEMBL
-
A0A8I5Y027
- Related
-
ENSRNOP00000081851.1
- Conserved Domains (5) summary
-
- cd13242
Location:891 → 1026
- PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
- pfam00169
Location:916 → 1018
- PH; PH domain
- pfam00621
Location:728 → 899
- RhoGEF; RhoGEF domain
- cl02488
Location:439 → 590
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cl15787
Location:189 → 313
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
XM_039098212.2 → XP_038954140.1 puratrophin-1 isoform X2
- UniProtKB/TrEMBL
-
A0A8I5Y027
- Related
-
ENSRNOP00000087289.1
- Conserved Domains (3) summary
-
- cd00160
Location:749 → 915
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cd13242
Location:915 → 1050
- PH_puratrophin-1; Puratrophin-1 pleckstrin homology (PH) domain
- cl02488
Location:463 → 614
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_063278643.1 → XP_063134713.1 puratrophin-1 isoform X5
- UniProtKB/TrEMBL
- A0A8I5Y027, A0A8I6AG98
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001135870.1: Suppressed sequence
- Description
- NM_001135870.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from frog (X.tr): plekhg4 (GeneID:779571).