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Rgs17 regulator of G-protein signaling 17 [ Rattus norvegicus (Norway rat) ]

Gene ID: 308118, updated on 5-Mar-2024

Summary

Official Symbol
Rgs17provided by RGD
Official Full Name
regulator of G-protein signaling 17provided by RGD
Primary source
RGD:1305515
See related
Ensembl:ENSRNOG00000018690 AllianceGenome:RGD:1305515
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Involved in response to amphetamine. Orthologous to human RGS17 (regulator of G protein signaling 17). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 133.3), Heart (RPKM 12.6) and 1 other tissue See more
Orthologs
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Genomic context

See Rgs17 in Genome Data Viewer
Location:
1q11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (44627583..44729957, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (42222248..42324625, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (42491566..42587735, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U2-19 Neighboring gene small nucleolar RNA U2-30 Neighboring gene mitochondrial translation release factor 1 like Neighboring gene uncharacterized LOC134484991 Neighboring gene ribosomal protein L30, pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from PubChem

General protein information

Preferred Names
regulator of G-protein signaling 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107459.1NP_001100929.1  regulator of G-protein signaling 17

    See identical proteins and their annotated locations for NP_001100929.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474052
    UniProtKB/TrEMBL
    A0A8I5ZV65, A6KIP2, F1M0G0
    Related
    ENSRNOP00000025355.5, ENSRNOT00000025355.8
    Conserved Domains (1) summary
    cl02565
    Location:41197
    RGS; Regulator of G protein signaling (RGS) domain superfamily

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    44627583..44729957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006227854.5XP_006227916.1  regulator of G-protein signaling 17 isoform X1

    See identical proteins and their annotated locations for XP_006227916.1

    UniProtKB/TrEMBL
    A0A8I5ZV65, A6KIP2, F1M0G0
    Conserved Domains (1) summary
    cl02565
    Location:41197
    RGS; Regulator of G protein signaling (RGS) domain superfamily
  2. XM_006227855.5XP_006227917.1  regulator of G-protein signaling 17 isoform X1

    See identical proteins and their annotated locations for XP_006227917.1

    UniProtKB/TrEMBL
    A0A8I5ZV65, A6KIP2, F1M0G0
    Conserved Domains (1) summary
    cl02565
    Location:41197
    RGS; Regulator of G protein signaling (RGS) domain superfamily