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Klk12 kallikrein related-peptidase 12 [ Rattus norvegicus (Norway rat) ]

Gene ID: 308564, updated on 13-Apr-2024

Summary

Official Symbol
Klk12provided by RGD
Official Full Name
kallikrein related-peptidase 12provided by RGD
Primary source
RGD:1308975
See related
Ensembl:ENSRNOG00000034012 AllianceGenome:RGD:1308975
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Klnk
Summary
Predicted to enable serine-type peptidase activity. Predicted to be involved in proteolysis. Predicted to be active in secretory granule. Orthologous to human KLK12 (kallikrein related peptidase 12). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Lung (RPKM 4.0), Testes (RPKM 0.3) and 1 other tissue See more
Orthologs
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Genomic context

Location:
1q22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (103359274..103364186)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (94222778..94227637)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (99706148..99711004)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 like 5 Neighboring gene kallikrein related-peptidase 13 Neighboring gene kallikrein related-peptidase 11 Neighboring gene kallikrein related-peptidase 10

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables peptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type peptidase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in proteolysis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in secretory granule IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
kallikrein-12
Names
kallikrein 12
kallikrein k

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107508.2NP_001100978.2  kallikrein-12 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A1R3UCK1, D3ZD22
    Related
    ENSRNOP00000024758.6, ENSRNOT00000024758.7

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    103359274..103364186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063261762.1XP_063117832.1  kallikrein-12 isoform X1

    UniProtKB/TrEMBL
    A0A1R3UCK1, D3ZD22