Crybg1 crystallin beta-gamma domain containing 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Crybg1provided by RGD
Official Full Name: crystallin beta-gamma domain containing 1provided by RGD
Primary source: RGD:1308629
See related: Ensembl:ENSRNOG00000025998 AllianceGenome:RGD:1308629
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Aim1
Summary: Predicted to enable carbohydrate binding activity. Orthologous to human CRYBG1 (crystallin beta-gamma domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Kidney (RPKM 78.5), Liver (RPKM 62.9) and 8 other tissues See more
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	20	NC_086038.1 (49007673..49204040, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	20	NC_051355.1 (47425030..47496918, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	20	NC_005119.4 (48927942..49123724, complement)

Chromosome 20 - NC_086038.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Preferred Names: absent in melanoma 1 protein; beta/gamma crystallin domain-containing protein 1

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The following sections contain reference sequences that belong to a specific genome build. Explain

XM_063279640.1 → XP_063135710.1 beta/gamma crystallin domain-containing protein 1 isoform X1

UniProtKB/TrEMBL

D3ZD79
XM_039099292.2 → XP_038955220.1 beta/gamma crystallin domain-containing protein 1 isoform X2

Related

ENSRNOP00000031671.7

Conserved Domains (6) summary

PHA03247
Location:174 → 901

PHA03247; large tegument protein UL36; Provisional

PRK07003
Location:178 → 439

PRK07003; DNA polymerase III subunit gamma/tau

PRK07764
Location:61 → 260

PRK07764; DNA polymerase III subunits gamma and tau; Validated

cd00161
Location:1868 → 1996

RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

pfam00030
Location:1495 → 1591

Crystall; Beta/Gamma crystallin

cl02528
Location:1301 → 1353

Crystall; Beta/Gamma crystallin