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Crybg1 crystallin beta-gamma domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 309866, updated on 11-Apr-2024

Summary

Official Symbol
Crybg1provided by RGD
Official Full Name
crystallin beta-gamma domain containing 1provided by RGD
Primary source
RGD:1308629
See related
Ensembl:ENSRNOG00000025998 AllianceGenome:RGD:1308629
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Aim1
Summary
Predicted to enable carbohydrate binding activity. Orthologous to human CRYBG1 (crystallin beta-gamma domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 78.5), Liver (RPKM 62.9) and 8 other tissues See more
Orthologs
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Genomic context

Location:
20q13
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (49007673..49204040, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (47425030..47496918, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (48927942..49123724, complement)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1 Neighboring gene reticulon 4 interacting protein 1 Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene uncharacterized LOC102554815

Genomic regions, transcripts, and products

General protein information

Preferred Names
absent in melanoma 1 protein; beta/gamma crystallin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    49007673..49204040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063279640.1XP_063135710.1  beta/gamma crystallin domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    D3ZD79
  2. XM_039099292.2XP_038955220.1  beta/gamma crystallin domain-containing protein 1 isoform X2

    Related
    ENSRNOP00000031671.7
    Conserved Domains (6) summary
    PHA03247
    Location:174901
    PHA03247; large tegument protein UL36; Provisional
    PRK07003
    Location:178439
    PRK07003; DNA polymerase III subunit gamma/tau
    PRK07764
    Location:61260
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd00161
    Location:18681996
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00030
    Location:14951591
    Crystall; Beta/Gamma crystallin
    cl02528
    Location:13011353
    Crystall; Beta/Gamma crystallin