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Clec2h C-type lectin domain family 2, member H [ Rattus norvegicus (Norway rat) ]

Gene ID: 312745, updated on 11-Apr-2024

Summary

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Symbol
Clec2hprovided by RGD
Full Name
C-type lectin domain family 2, member Hprovided by RGD
Primary source
RGD:1306865
See related
Ensembl:ENSRNOG00000061757 AllianceGenome:RGD:1306865
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Clecsf2; AABR07062154.2
Expression
Biased expression in Thymus (RPKM 7.5), Spleen (RPKM 2.4) and 7 other tissues See more
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Genomic context

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Location:
4q42
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (164179295..164190778, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (162493307..162503318, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (162810384..162844330, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene killer cell lectin like receptor B1 Neighboring gene ARL14 effector protein-like Neighboring gene ankyrin repeat domain-containing protein 13C-like Neighboring gene C-type lectin domain family 2, member E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
C-type lectin domain family 2 member H; C-type lectin domain family 2 member E
Names
C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 2 (activation-induced)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    164179295..164190778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063286985.1 → XP_063143055.1  C-type lectin domain family 2 member E isoform X3

  2. XM_063286984.1 → XP_063143054.1  C-type lectin domain family 2 member E isoform X2

  3. XM_063286983.1 → XP_063143053.1  C-type lectin domain family 2 member H isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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